Input sequence

Protein name RNA polymerase sigma factor sigF, chloroplastic
Organism Arabidopsis thaliana Length 547
Disorder content 39.9% ProS content 25.2%
IDEAL NA UniProt Q9LD95

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 547 1-64 65-73 74-227 228-547 65-73 228-547 1-64 74-227 1-20 39-64 74-115 136-145 154-161 183-214 303-541 283-541 311-364 392-467 311-381 385-467 479-532 280-375 476-535 381-430 228-381 384-458 441-545 22-29 142-157 172-181 263-274 4jk1X(279-517) 1e-47 37.66% 4jk1X(252-517) 1e-53 35.34% PF04542(1-54) 2e-05 38.89% PF04539(3-78) 7e-05 27.63% PF04542 3e-23 87.9% PF04539 2.3e-23 88.2% PF04545 1.3e-22 85.7% 1sigA(203-302) 1e-23 44.0% 1ku3A(2-61) 6e-14 35.0% 1l0oC(3-52) 1e-05 20.0% a.177.1 5.3e-47 159.6% a.4.13 2.2e-14 49.0% a.4.13 2.1e-24 87.9%

Sequence

MEATRNLVSSSPSFQTKTHLKSSYSSPSSVVMLHDQTTTPVVNSRHLNSLSRHFPASVLS
QEPREESRPLSHALRDDRTSQLTLERRQFDELVSSREDEKFEQQLLHSTGLWNLLISPLT
SETKLPAVVSPLADAELCDVVALAQKALSASKQAALLVDDTEANPSDNIKDSLSTSSSMS
LPEKGNIVRSKRQLERRAKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLW
GPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSD
IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA
TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVG
VSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLL
NVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLH
AYADLLV

Region:1-547
Length:547aa
Label:Full sequence
Reset:click