Input sequence

Protein name Putative cyclic nucleotide-gated ion channel 13
Organism Arabidopsis thaliana Length 696
Disorder content 18.7% ProS content 15.1%
IDEAL NA UniProt Q9LD40

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 696 1-62 63-628 629-696 63-628 1-62 629-696 1-47 59-62 629-646 656-677 683-696 469-592 406-519 271-532 457-610 122-391 492-592 410-603 335-395 70-411 399-605 671-684 82-103 118-137 169-191 242-264 366-388 1wgpA(8-131) 8e-47 69.35% 4d7sA(8-121) 8e-13 31.58% 16vpA(50-311) 6e-40 6.49% 1vp6A(3-132) 4e-18 26.62% PF00520 5.1e-17 67.1% PF00027 3.7e-06 31.1% 1q3eA(12-188) 1e-23 24.74% 1bl8A(32-92) 3e-06 13.11% f.14.1 9.5e-31 106.8% b.82.3 1.2e-34 120.7%

Sequence

MAFGRNNRVRFRDWISEGTEYGYGRNKARPSLNTVLKNVRRGLKKPLSFGSHNKKRDSNS
STTTQKNIINPQGSFLQNWNKIFLFASVIALAIDPLFFYIPIVDGERHCLNLHRNLEIAA
SVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLLSIL
PLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAW
AGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSVRND
FLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQN
LNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRM
LPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDE
QLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPS
DFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFRRLHSKQLQH
TFRFYSVQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVAT
LYASRFASNALRNLRTNNLPLLPPKPSEPDFSLRNP

Region:1-696
Length:696aa
Label:Full sequence
Reset:click