Input sequence

Protein name Probable cyclic nucleotide-gated ion channel 20, chloroplastic
Organism Arabidopsis thaliana Length 764
Disorder content 20.9% ProS content 16.8%
IDEAL NA UniProt Q9LD37

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 764 1-115 116-147 148-181 182-753 754-764 116-147 182-753 1-115 148-181 754-764 1-14 23-83 99-115 148-152 162-181 754-764 588-715 384-647 587-715 246-511 530-718 194-531 519-730 19-33 305-316 495-509 746-755 202-224 244-266 301-323 330-352 367-389 486-508 1wgpA(8-131) 2e-17 40.3% 16vpA(48-307) 1e-20 6.42% 1wgpA(7-131) 4e-18 38.52% PF00520 2.5e-14 58.2% 1q3eA(12-180) 1e-14 20.0% f.14.1 7e-29 100.3% b.82.3 1.3e-26 92.7%

Sequence

MASHNENDDIPMLPISDPSSRTRARAFTSRSRSVSLSNPTSSIEGFDTSTVVLGYTGPLR
TQRRPPLVQMSGPLTSTRKHEPLFLPHPSSDSVGVSSQPERYPSFAALEHKNSSEDEFVL
KHANLLRSGQLGMCNDPYCTTCPSYYNRKAAQIPTSRVSALFDSTFHNALYDDAKGWARR
FASSVNRYLPGIMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKVQEQNKCIMIDWPM
TKAFVAVRSVTDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLKGKFFLDL
FIVMPLPQILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIF
ESAWANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGNFGRECQDLIDCGNGNSS
VLVRATWKDNASANACFQEDGFPYGIYLKAVNLTNHSNLFTRYSYSLFWGFQQISTLAGN
QVPSYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKRNLEMTLRRRDVEQWMSHRR
LPDGIRRRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHLFKFLKKVRIFSLMDEP
ILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEMESIGEDGSVLPLYEGDVCGEEL
LTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSH
RVQGAIRYDSPYWRLRAARQIQVAWRYRRRRLHRLCTPQSSYSL

Region:1-764
Length:764aa
Label:Full sequence
Reset:click