Input sequence

Protein name High affinity choline transporter 1
Organism Rattus norvegicus Length 580
Disorder content 12.2% ProS content 6.2%
IDEAL NA UniProt Q9JMD7

Prediction

Order Disorder ProS RPS-BLAST:Pfam HMMER:Pfam SEG:LCR TMHMM:TMhelix 0 580 1-31 32-37 38-348 349-355 356-485 486-490 491-521 522-580 1-31 38-348 356-485 491-521 349-355 486-490 522-580 349-355 486-490 544-548 554-567 576-580 44-442 42-442 89-100 153-168 339-357 5-27 49-71 81-103 129-151 161-183 190-212 232-254 275-297 322-344 377-399 404-426 433-455 PF00474(3-401) 4e-15 30.94% PF00474 5.7e-09 1.5%

Sequence

MPFHVEGLVAIILFYLLIFLVGIWAAWKTKNSGNAEERSEAIIVGGRDIGLLVGGFTMTA
TWVGGGYINGTAEAVYGPGCGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQ
IYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDVNISVIVSALIAILYTLVGG
LYSVAYTDVVQLFCIFIGLWISVPFALSHPAVTDIGFTAVHAKYQSPWLGTIESVEVYTW
LDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAICIGAIGASTDW
NQTAYGFPDPKTKEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFA
RNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQ
LLCVLFIKGTNTYGAVAGYIFGLFLRITGGEPYLYLQPLIFYPGYYPDKNGIYNQRFPFK
TLSMVTSFFTNICVSYLAKYLFESGTLPPKLDIFDAVVSRHSEENMDKTILVRNENIKLN
ELAPVKPRQSLTLSSTFTNKEALLDVDSSPEGSGTEDNLQ

Region:1-580
Length:580aa
Label:Full sequence
Reset:click