Input sequence

Protein name Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
Organism Rattus norvegicus Length 780
Disorder content 36.5% ProS content 6.4%
IDEAL NA UniProt Q9JKA8

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 780 1-51 52-546 547-780 52-546 1-51 547-780 44-51 547-559 565-587 601-606 353-549 353-549 56-120 446-527 47-123 127-345 445-530 353-545 271-416 86-385 353-545 13-32 214-228 358-369 558-568 637-657 699-718 93-115 3otfA(1-197) 2e-88 85.28% 3otfA(1-197) 4e-46 85.28% PF08412(2-66) 2e-29 84.62% PF00027(2-88) 0.0008 34.09% PF08412 1.1e-57 202.3% PF00520 5.1e-22 83.7% PF00027 9.8e-23 86.1% 1q3eA(1-192) 3e-33 81.35% 1f6fA(4-166) 1e-15 9.2% f.14.1 8.9e-37 127.8% b.82.3 4e-51 178.0%

Sequence

MEEEARPAVGDGEAATPARETPPAAPAQARAASGGVPESAPEPKRRQLGTLLQPTVNKFS
LRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKEE
NSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSI
PVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYMHQWEEIFHMT
YDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHA
LFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCRG
LVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGAR
DTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAM
DRLRRIGKKNSILQRKRSEPSPGSSSGGVMEQHLVQHDRDMARGIRGLAPGTGARLSGKP
VLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPATLLARSARRSAGSPASPLVPV
RAGPLLARGPWASTSRLPAPPARTLHASLSRTGRSQVSLLGPPPGGGGRRLGPRGRPLSA
SQPSLPQRATGDGSPRRKGSGSERLPPSGLLAKPPGTVQPSRSSVPEPVTPRGPQISANM

Region:1-780
Length:780aa
Label:Full sequence
Reset:click