Input sequence

Protein name Sodium channel protein type 5 subunit alpha
Organism Mus musculus Length 2019
Disorder content 25.6% ProS content 19.0%
IDEAL NA UniProt Q9JJV9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2019 1-5 6-25 26-69 70-451 452-650 651-948 949-955 956-987 988-1163 1164-1933 1934-2019 6-25 70-451 651-948 956-987 1164-1933 1-5 26-69 452-650 949-955 988-1163 1934-2019 1-5 26-69 452-460 475-570 576-635 645-650 1004-1098 1115-1119 1139-1151 1934-1961 1977-1990 2011-2019 1778-1930 1485-1505 1778-1930 1485-1505 160-179 1245-1471 160-412 1565-1773 751-928 486-668 1131-1217 159-412 751-940 955-1217 1243-1471 1564-1773 1525-1612 713-799 1203-1289 173-273 767-836 1578-1689 118-421 684-970 1128-1480 1517-1801 474-484 804-816 844-856 929-946 1008-1027 1055-1085 1098-1115 1303-1318 1627-1646 1960-1982 413-451 127-149 253-275 391-413 714-736 749-771 786-807 839-861 881-898 918-940 1207-1226 1247-1264 1279-1301 1328-1350 1450-1472 1532-1549 1559-1579 1592-1614 1662-1684 1749-1771 4dckA(1-153) 5e-80 97.39% 1byyA(1-21) 8e-05 100.0% 4dckA(1-153) 2e-57 97.39% 1byyA(1-21) 5e-06 100.0% 1qg9A(2-21) 0.0001 90.0% PF00520(3-198) 3e-34 40.61% PF00520(2-198) 4e-25 29.73% PF00520(2-198) 1e-15 34.09% PF00520(1-186) 8e-13 37.97% PF11933(30-219) 3e-21 38.14% PF06512(133-219) 1e-13 41.67% PF00520 1.4e-73 255.0% PF00520 1.3e-58 205.3% PF06512 1.4e-139 474.3% PF00520 3.2e-70 243.9% PF00520 6.1e-60 209.7% 1orsC(1-89) 5e-18 11.24% 1orsC(2-88) 4e-13 11.36% 1orsC(2-86) 4e-11 12.64% 2e9xC1(1-103) 4e-14 12.39% 2e9xC1(3-83) 0.0002 12.35% 2e9xC1(1-105) 0.0002 12.93% f.14.1 1.7e-29 102.4% f.14.1 2.3e-28 98.5% f.14.1 8.7e-41 141.7% f.14.1 4.2e-35 121.9%

Sequence

MANFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSATSQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTELNGTNGSVEADGIV
WNSLDVYLNDPANYLLKNGTTDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTNHERRSKRRK
RLSSGTEDGGDDRLPKSDSEDGPRALNQLSLTHGLSRTSMRPRSSRGSIFTFRRRDQGSE
ADFADDENSTAGESESHRTSLLVPWPLRRPSTQGQPGFGTSAPGHVLNGKRNSTVDCNGV
VSLLGAGDAEATSPGSHLLRPIVLDRPPDTTTPSEEPGGPQMLTPQAPCADGFEEPGARQ
RALSAVSVLTSALEELEESHRKCPPCWNRFAQHYLIWECCPLWMSIKQKVKFVVMDPFAD
LTITMCIVLNTLFMALEHYNMTAEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSGLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGEMNN
LQLALARIQRGLRFVKRTTWDFCCGLLRRRPKKPAALATHSQLPSCIAAPRSPPPPEVEK
APPARKETRFEEDKRPGQGTPGDTEPVCVPIAVAESDTDDQEEDEENSLGTEEEESSKQE
SQVVSGGHEPPQEPRAWSQVSETTSSEAEASTSQADWQQEREAEPRAPGCGETPEDSYSE
GSTADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCMVDTTQAPGKVWWRLRKTC
YRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKW
VAYGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIV
NNKSECESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQP
QWEDNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVN
ILAKINLLFVAIFTGECIVKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFS
PTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMAN
FAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSNGS
RGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIW
EKFDPEATQFIEYLALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFT
KRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLLQ
RSVKHASFLFRQQAGSSGLSDEDAPEREGLIAYMMNENFSRRSGPLSSSSISSTSFPPSY
DSVTRATSDNLPVRASDYSRSEDLADFPPSPDRDRESIV

Region:1-2019
Length:2019aa
Label:Full sequence
Reset:click