Input sequence

Protein name Junctional adhesion molecule A
Organism Rattus norvegicus Length 300
Disorder content 24.3% ProS content 18.7%
IDEAL NA UniProt Q9JHY1

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 300 1-27 28-171 172-177 178-184 185-261 262-300 28-171 185-261 1-27 178-184 262-300 1-27 262-271 277-283 289-300 27-237 29-233 33-116 139-224 27-128 145-214 27-128 125-221 29-152 123-231 238-260 239-261 1f97A(1-206) 1e-106 86.73% 1nbqA(6-209) 9e-65 70.24% PF07679(5-80) 2e-05 34.09% PF07679(6-84) 2e-05 36.36% PF07686 2.8e-06 31.5% PF00047 5.6e-07 33.8% 1f97A1(1-102) 1e-11 89.22% 1f6aB1(4-100) 9e-10 11.34% b.1.1 9.9e-22 62.3% b.1.1 3.9e-20 58.7%

Sequence

MGTEGKAGSKLLFLFTSMILGSLVQGKGSVYSPQTAVQVPENDSVKLPCIYSGFSSPRVE
WKFVQGSTTALVCYNNQITVPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEDGGQNYGE
VSIHLTVLVPPSKPTVSIPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGVPMLTADAKKT
RAFINSSYTIDPKSGDLVFDPVSAFDSGEYYCEAQNGYGTAMRSEAVRMEAVELNVGGIV
AAVLVTLILLGLLIFGIWFAYSRGYFERTKKGTAPGKKVIYSQPSARSEGEFKQTSSFLV

Region:1-300
Length:300aa
Label:Full sequence
Reset:click