Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g12100, mitochondrial
Organism Arabidopsis thaliana Length 816
Disorder content 5.6% ProS content 3.8%
IDEAL NA UniProt Q9FMQ1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 816 1-46 47-50 51-816 51-816 1-46 1-8 18-40 353-642 182-468 532-796 186-805 110-247 215-249 250-284 285-319 320-354 355-389 390-424 425-459 460-494 495-529 530-564 565-599 600-634 666-700 701-735 736-770 218-435 358-574 568-776 122-298 63-379 387-763 4-13 38-49 59-70 95-106 143-154 4wslA(2-291) 8e-60 41.72% 4wslA(6-292) 4e-54 40.07% 4wslA(6-274) 3e-45 40.52% 4m57A(43-638) 2e-80 20.13% 4ozsA(38-175) 3e-12 30.43% PF01535 9.9e-10 42.9% PF01535 1.6e-11 48.9% PF01535 1.4e-11 49.1% PF01535 0.00042 24.2% PF01535 8.5e-07 33.2% PF01535 9.9e-10 42.9% PF01535 8.7e-06 29.8% PF01535 4.1e-09 40.9% PF01535 1.9e-06 32.0% PF01535 3.2e-09 41.3% PF01535 1.7e-11 48.8% PF01535 6.4e-12 50.2% PF01535 3.4e-05 27.9% PF01535 0.001 22.9% PF01535 2.8e-06 31.5% 2fsqA1(2-215) 2e-33 9.05% 2fsqA1(2-214) 9e-32 7.73% 2fsqA1(2-210) 7e-27 8.8% 2fsqA1(11-220) 5e-12 8.06% a.118.8 2.9e-18 62.1% a.118.8 1.1e-21 74.1%

Sequence

MVTRLRLVSRSSRYATVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLR
NLRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN
ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF
MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM
LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV
EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL
LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM
KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD
ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC
SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF
TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS
LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR
SLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL
KEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEKL

Region:1-816
Length:816aa
Label:Full sequence
Reset:click