Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g55740, chloroplastic
Organism Arabidopsis thaliana Length 830
Disorder content 0.5% ProS content 0.5%
IDEAL NA UniProt Q9FM64

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 830 1-826 827-830 1-826 827-830 827-830 238-521 411-713 118-272 687-782 238-520 440-726 35-349 240-274 341-375 442-476 477-511 512-546 614-648 587-814 314-521 243-347 143-246 480-620 42-145 315-502 440-774 12-24 552-563 4wslA(2-293) 2e-33 28.77% 4wslA(4-277) 4e-29 26.05% 4ozsA(13-175) 2e-09 29.09% 4ozsA(5-104) 0.0006 30.0% 4wslA(2-292) 1e-44 28.87% 4wslA(2-293) 3e-39 25.51% 4wslA(3-292) 7e-25 23.53% PF01535 7.9e-11 46.6% PF01535 1.4e-06 32.5% PF01535 3.6e-08 37.7% PF01535 2.2e-09 41.8% PF01535 4.4e-10 44.1% PF01535 3.7e-05 27.7% 2fsqA1(3-230) 2e-35 8.09% 2fsqA1(3-214) 1e-25 5.53% 1nnvA(2-105) 1e-14 11.32% 1nnvA(3-105) 4e-09 13.33% 1nnvA(2-105) 8e-08 12.06% 1nnvA(5-105) 2e-06 11.54% a.118.8 3.1e-17 54.6% a.118.8 1e-29 102.4%

Sequence

MASLPFNTIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTE
MDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC
DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVC
KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV
AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA
IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI
YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY
AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN
LIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES
GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINK
AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNH
AGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQ
SLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKG
LKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGTGSK

Region:1-830
Length:830aa
Label:Full sequence
Reset:click