Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g52850, chloroplastic
Organism Arabidopsis thaliana Length 893
Disorder content 1.8% ProS content 1.8%
IDEAL NA UniProt Q9FLX6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 893 1-16 17-893 17-893 1-16 1-16 391-704 157-434 77-232 82-691 614-797 90-124 191-225 291-325 393-427 494-528 595-629 567-795 264-503 77-232 194-297 497-601 737-871 56-239 390-755 54-69 4wslA(2-290) 6e-27 28.0% 4wslA(1-290) 2e-21 26.46% 4pjrA(6-169) 2e-11 26.83% 4m57A(32-662) 2e-54 17.33% 3spaA(29-215) 0.0002 15.62% PF01535 4e-08 37.6% PF01535 5.7e-09 40.4% PF01535 2.8e-07 34.8% PF01535 4.1e-08 37.6% PF01535 0.00082 23.3% PF01535 1.1e-07 36.1% 2fsqA1(2-231) 4e-38 10.13% 2fsqA1(3-214) 1e-17 5.93% 2fsqA1(17-176) 2e-13 9.47% 1nnvA(2-105) 7e-10 15.24% 1nnvA(2-105) 2e-08 9.43% 1ug9A4(4-135) 2e-14 4.67% a.118.8 3.8e-12 37.7% a.118.8 5.8e-27 92.7%

Sequence

MTSKVVAAAASAFLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDL
CNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGT
HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE
LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL
EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF
VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST
DVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK
REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY
AWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASAN
LGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGL
VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYN
IEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMA
NKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSF
VSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPV
HVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCKREETSFV

Region:1-893
Length:893aa
Label:Full sequence
Reset:click