Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g39980, chloroplastic
Organism Arabidopsis thaliana Length 678
Disorder content 8.3% ProS content 3.1%
IDEAL NA UniProt Q9FLD8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 678 1-56 57-678 57-678 1-56 1-21 192-477 399-673 72-303 91-671 191-225 261-295 296-330 331-365 366-400 401-435 436-470 537-571 264-492 125-336 404-605 577-675 129-496 508-670 7-18 45-52 4wslA(5-290) 2e-51 37.76% 4wslA(2-280) 7e-33 30.47% 4wslA(56-291) 3e-25 27.43% 4m57A(7-601) 8e-60 20.0% PF01535 6.4e-07 33.6% PF01535 4.5e-10 44.1% PF01535 2.7e-07 34.9% PF01535 3.1e-07 34.6% PF01535 5.7e-07 33.8% PF01535 2.3e-10 45.0% PF01535 1.5e-06 32.4% PF01535 7.5e-06 30.0% 2fsqA1(2-228) 1e-26 7.69% 2fsqA1(4-210) 5e-20 10.23% 2fsqA1(2-203) 1e-17 8.61% 2fsqA1(4-103) 2e-05 10.89% a.118.8 5.5e-28 96.3% a.118.8 8.6e-13 42.8%

Sequence

MYIEIASSSSLSLPLLPLTRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVWR
KQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQL
SIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDE
MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD
YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST
LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD
IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT
NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY
ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFG
CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE
GCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDA
SRVMNRMRERGILKPFPG

Region:1-678
Length:678aa
Label:Full sequence
Reset:click