Input sequence

Protein name Nuclear pore complex protein NUP88
Organism Arabidopsis thaliana Length 810
Disorder content 24.0% ProS content 13.2%
IDEAL NA UniProt Q9FFK6

Prediction

Order Disorder ProS RPS-BLAST:Pfam RPS-BLAST:Pfam SEG:LCR COILS:coiledCoil 0 810 1-23 24-38 39-42 43-50 51-87 88-94 95-278 279-283 284-304 305-310 311-320 321-326 327-334 335-346 347-411 412-427 428-498 499-504 505-565 566-616 617-738 739-810 24-38 51-87 95-278 284-304 311-320 327-334 347-411 428-498 505-565 617-738 1-23 43-50 321-326 335-346 412-427 499-504 566-616 739-810 1-7 18-23 321-326 335-346 412-416 566-570 583-599 739-746 770-810 106-249 439-741 69-81 276-290 646-701 PF10168(41-190) 2e-11 32.26% PF10168(262-568) 3e-09 25.31%

Sequence

MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG
DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV
LLAGSDGICVMYLFGRASVIEDNVICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLGI
LSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFIL
FTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFPD
LTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLLY
NLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNISE
LPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHDG
GIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQEESAVSPLLGFVPLSDSFGYSWIV
AVLSSGECIVAEMKTWDLLLPIHVSTDKTVSSSAIEKKEQENSCIISKELLAGPKIRIAP
HALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIIDDQHQRL
AEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAELDFKSEL
DQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQMSQLQST
LAKLSLMNSDNSKKVKIVESALKSQESSFM

Region:1-810
Length:810aa
Label:Full sequence
Reset:click