Input sequence

Protein name Sodium channel protein type 4 subunit alpha
Organism Mus musculus Length 1841
Disorder content 18.1% ProS content 12.0%
IDEAL NA UniProt Q9ER60

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1841 1-3 4-28 29-55 56-300 301-313 314-486 487-531 532-805 806-810 811-841 842-980 981-1322 1323-1328 1329-1746 1747-1841 4-28 56-300 314-486 532-805 811-841 981-1322 1329-1746 1-3 29-55 301-313 487-531 806-810 842-980 1323-1328 1747-1841 1-3 29-42 52-55 301-313 497-531 842-847 858-894 903-931 937-966 1323-1328 1747-1777 1830-1841 1596-1748 1302-1322 1596-1748 1302-1322 159-179 1063-1288 1382-1543 160-280 606-783 367-440 882-1035 159-440 606-795 810-1035 1061-1288 1381-1591 1342-1460 568-653 1021-1107 173-273 85-449 539-815 1005-1297 1331-1619 473-491 659-671 699-711 784-808 834-846 863-877 966-986 1121-1136 1566-1582 1815-1827 445-486 101-120 127-149 253-272 379-398 418-440 566-588 603-625 638-660 690-712 773-795 1025-1044 1065-1087 1091-1113 1146-1168 1267-1289 1343-1365 1378-1400 1405-1427 1479-1501 1567-1589 4dckA(1-153) 1e-64 76.47% 1byyA(1-21) 0.0002 95.24% 4dckA(1-153) 5e-53 76.47% 1byyA(1-21) 6e-06 95.24% 1qg9A(1-21) 0.0004 90.48% PF00520(3-198) 3e-34 40.71% PF00520(2-171) 7e-24 38.73% PF00520(2-124) 1e-19 38.58% PF00520(1-186) 6e-13 36.36% PF00520(126-198) 1e-10 40.54% PF06512(64-219) 6e-20 39.87% PF00520 1.5e-70 245.0% PF00520 1.4e-61 215.1% PF06512 7.7e-105 358.9% PF00520 4.3e-71 246.8% PF00520 3.1e-64 224.0% 1orsC(1-117) 1e-22 16.53% 1orsC(2-87) 4e-13 11.49% 1orsC(2-86) 1e-10 12.64% 2e9xC1(1-103) 1e-12 11.5% f.14.1 5.3e-28 97.2% f.14.1 3.9e-29 101.2% f.14.1 1.1e-37 130.9% f.14.1 5.4e-36 125.0%

Sequence

MASSSLPTLVPPGPHCLRPFTPESLAAIEQRAMEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGVPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSIV
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTW
YGNDTWYGNDTWYGNDTWNSQESWVSNSTFDWEAYINDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAK
AAQALEGGEEADGDPTHSKDCNGSLDTSGEKGPPRPSCSAESAISDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCAPWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DNVLSVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIAFAKTFLLGLLHG
KILSLKDIMLSLGEPGGAGENGESPPEDEKKEPPPEDGNKELKDNHILNHVGLTDGPRSS
IEMDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDIKKPLQPLYDGNSSVCS
TADYKPPEEDPEEQAEENPEGELPEECFTEACVKRCPCLYVDISQGRGKMWWTLRRACFK
IVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVA
YGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGM
RVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISVVNNK
SECESLMYTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPDYE
VNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILY
NINMVFIIVFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTL
FRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAY
VKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNIKG
DCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEK
FDPDATQFIDYSRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKE
VLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRS
VKQASYMYRHSQEGNGDGAPEKEGLLANTMNKMYGSEKEDNGVQSQGEKEKDSTEDAGPT
TEVTAPSSSDTALTPPPPSPPPPSSPPQGQTVRPGVKESLV

Region:1-1841
Length:1841aa
Label:Full sequence
Reset:click