Input sequence

Protein name Voltage-dependent T-type calcium channel subunit alpha-1H
Organism Rattus norvegicus Length 2359
Disorder content 48.5% ProS content 23.7%
IDEAL NA UniProt Q9EQ60

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2359 1-65 66-427 428-452 453-460 461-470 471-476 477-769 770-1016 1017-1263 1264-1267 1268-1272 1273-1405 1406-1418 1419-1874 1875-2359 66-427 453-460 471-476 770-1016 1264-1267 1273-1405 1419-1874 1-65 428-452 461-470 477-769 1017-1263 1268-1272 1406-1418 1875-2359 10-14 52-63 428-442 449-452 461-470 477-483 491-496 518-525 544-553 559-568 573-587 612-616 646-678 694-707 717-743 749-769 1017-1022 1030-1064 1093-1106 1119-1149 1155-1166 1199-1207 1223-1263 1268-1272 1406-1418 1883-1893 1907-1942 1964-1979 1986-2020 2133-2163 2195-2203 2219-2241 2264-2279 2328-2335 2353-2359 945-1047 1658-1823 1341-1565 826-1011 330-418 149-263 138-418 824-1011 1341-1565 1656-1864 1618-1753 786-870 96-208 100-427 752-1020 1289-1574 1615-1873 16-37 138-148 219-230 238-249 393-404 498-511 515-531 557-568 708-723 877-895 917-931 1130-1147 1248-1259 1377-1392 1403-1420 1576-1602 1757-1766 1850-1864 1937-1948 1978-1985 2051-2063 2086-2097 2239-2251 1568-1602 142-161 234-256 364-386 396-418 912-934 987-1009 1344-1366 1381-1403 1441-1463 1544-1566 1619-1641 1656-1678 1757-1779 1794-1812 1833-1855 4ltoA(26-129) 1e-10 18.69% PF00520(3-168) 8e-26 38.51% PF00520(1-198) 8e-23 37.66% PF00520(3-198) 5e-19 39.29% PF00520(117-198) 1e-11 47.19% PF00520(12-127) 4e-09 43.7% PF00520 2.1e-62 217.9% PF00520 8.5e-57 199.3% PF00520 7.6e-68 236.0% PF00520 1.4e-58 205.2% 1orsC(2-132) 6e-18 15.22% 1orsC(2-86) 2e-11 10.47% 1orsC(2-107) 4e-10 15.04% f.14.1 2.8e-36 126.0% f.14.1 3.4e-37 129.2% f.14.1 7.2e-37 128.1% f.14.1 1.3e-35 123.7%

Sequence

MTEGTLAADEVRVPLGASPPAPAAPVRASPASPGAPGREEQGGSGSGVLAPESPGTECGA
DLGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHISMLVIMLNCVTLGMF
RPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVM
AGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLDSAFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQ
KCSHIPSRRELRVQCTLGWEAYGQPQAEDGGAGRNACINWNQYYNVCRSGEFNPHNGAIN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIMGSFFMINLCLVVIAT
QFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIFRKVKRRSLRLYA
RWQSRWRKKVDPSSTVHGQGPGRRPRRAGRRTASVHHLVYHHHHHHHHHYHFSHGGPRRP
SPEPGAGDNRLVRACAPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVAHSIATAA
SLKLASGLGTMNYPTILPSGTVNSKGGTSSRPKGLRGAGAPGAAVHSPLSLGSPRPYEKI
QDVVGEQGLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFEFSGSESG
DSDAHGVYEFTQDVRHGDCRDPVQQPHEVGTPGHSNERRRTPLRKASQPGGIGHLWASFS
GKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPEELTNALEISNIVFTSMFALEMLLK
LLACGPLGYIRNPYNIFDGIVVVISVWEIVGQANGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDTDEDKTSTQLEGDFDKLRDLRATEMKMYSLAVTPNGHLEGRGSLPPPLITHTAAT
PMPTPKSSPNLDVAHALLDSRRSSSGSVDPQLGDQKSLASLRSSPCTPWGPNSAGSSRRS
SWNSLGRAPSLKRRNQCGERESLLSGEGKGSTDDEAEDSRPSTGTHPGASPGPRATPLRR
AESLDHRSTLDLCPPRPAALLPTKFHDCNGQMVALPSEFFLRIDSHKEDAAEFDDDIEDS
CCFRLHKVLEPYAPQWCRSRESWALYLFPPQNRLRVSCQKVIAHKMFDHVVLVFIFLNCI
TIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGEHAYLQSSWNVLDG
LLVLVSLVDIIVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRP
IGNIVLICCAFFIIFGILGVQLFKGKFYYCEGTDTRNITTKAECHAAHYRWVRRKYNFDN
LGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNM
FVGVVVENFHKCRQHQEAEEARRREEKRLRRLERRRRKAQRRPYYADYSHTRRSIHSLCT
SHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVAFGFRR
FFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNFG
MAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPALSPVYFVTFMLVAQFVLVNVV
VAVLMKHLEESNKEAREDAEMDAEIELEMAQGSTAQPPPTAQESQGTQPDTPNLLVVRKV
SVSRMLSLPNDSYMFRPVAPAAAPHSHPLQEVEMETYTGPVTSAHSPPLEPRASFQVPSA
ASSPARVSDPLCALSPRGTPRSLSLSRILCRQEAMHSESLEGKVDDVGGDSIPDYTEPAE
NMSTSQASTGAPRSPPCSPRPASVRTRKHTFGQRCISSRPPTLGGDEAEAADPADEEVSH
ITSSAHPWPATEPHSPEASPTASPVKGTMGSGRDPRRFCSVDAQSFLDKPGRPDAQRWSS
VELDNGESHLESGEVRGRASELEPALGSRRKKKMSPPCISIEPPTKDEGSSRPPAAEGGN
TTLRRRTPSCEAALHRDCPEPTEGPGTGGDPVAKGERWGQASCRAEHLTVPNFAFEPLDM
GGPGGDCFLDSDQSVTPEPRVSSLGAIVPLILETELSMPSGDCPEKEQGLYLTVPQTPLK
KPGSTPATPAPDDSGDEPV

Region:1-2359
Length:2359aa
Label:Full sequence
Reset:click