Input sequence

Protein name Cleavage and polyadenylation specificity factor subunit 1
Organism Mus musculus Length 1441
Disorder content 14.2% ProS content 5.9%
IDEAL NA UniProt Q9EPU4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR 0 1441 1-47 48-50 51-56 57-61 62-171 172-175 176-179 180-402 403-405 406-456 457-487 488-493 494-540 541-543 544-565 566-714 715-778 779-821 822-827 828-839 840-879 880-885 886-904 905-906 907-920 921-1049 1050-1056 1057-1310 1311-1328 1329-1441 1-47 62-171 180-402 457-487 494-540 566-714 779-821 840-879 886-904 921-1049 1057-1310 1329-1441 51-56 172-175 406-456 488-493 544-565 715-778 828-839 907-920 1050-1056 1311-1328 173-174 416-422 429-449 488-493 727-754 833-839 907-916 1311-1314 1118-1437 8-395 466-627 936-1433 2-680 1074-1406 1068-1375 543-557 902-910 4a0aA(488-779) 1e-16 24.38% 4a0aA(9-331) 1e-08 18.16% 2b5lA(351-479) 8e-05 24.54% 2b5lA(644-1123) 1e-62 18.41% 2b5lA(3-534) 7e-46 15.31% PF03178(4-304) 4e-49 37.5% PF03178 2.2e-159 540.1%

Sequence

MYAVYKQAHPPTGLEFTMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDGSTEGK
AHREKLELVASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL
HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLIYGTRLVVLPFRRESLAEEHEGLMGEG
QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSI
VAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQSVPPYGVAL
NSLTTGTTAFPLRTQEGVRITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAF
HFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASSVREAADKEEPPSK
KKRVEPAVGWTGGKTVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSMLNIGPCANAAVG
EPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAP
VRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQTGQEIMELDTSGFAT
QGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAE
GHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVIALCLYRDVSGMFTTESRLGGARDELG
GRSGSEAEGLGSETSPTVDDEEEMLYGDSSALFSPSKEEARRSSQPPADRDPAPFKADPT
HWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEVRKEEATRQGE
LPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFR
EKKPKPSKKKAEGCSTEEGSGGRGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALR
LHPMGIDGPIDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTA
HYVAYHVESKVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPV
SWEAIPNARIELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIM
DVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTG
MAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMV
DNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGAAEG
PSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFR
MLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTAH
F

Region:1-1441
Length:1441aa
Label:Full sequence
Reset:click