Input sequence

Protein name Tripartite motif-containing protein 42
Organism Mus musculus Length 723
Disorder content 12.0% ProS content 7.1%
IDEAL NA UniProt Q9D2H5

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 723 1-3 4-104 105-140 141-341 342-353 354-453 454-458 459-540 541-566 567-598 599-603 604-723 4-104 141-341 354-453 459-540 567-598 604-723 1-3 105-140 342-353 454-458 541-566 599-603 105-112 120-132 138-140 342-353 454-458 541-550 236-326 136-195 599-703 11-144 289-326 285-326 601-691 277-454 595-701 5-330 123-227 288-326 599-699 386-399 384-411 2junA(4-99) 1e-10 33.33% 2egpA(5-63) 0.001 35.0% 2crzA(4-106) 8e-07 23.36% 1l1oC(37-167) 6e-05 8.96% 2dq5A(7-45) 0.0007 38.46% PF00643 0.00031 24.6% PF00041 2.1e-05 28.5% 3b8mA1(58-234) 6e-15 11.96% 1ujtA(6-114) 4e-11 15.32% 1a6rA(46-373) 0.0004 6.1% g.44.1 5.5e-10 33.6% g.43.1 9.2e-06 23.0% b.1.2 2.1e-13 47.7%

Sequence

METAMCVCSPCCTWQRCCPRLFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAEN
PNCHWCCCSWANDPNCKCCCTASTNLKCYYYESHCCRNVTITFRKGRLRSIVTSSKTALR
VGSSDTQMDEPKTMPASSHLVSHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPMCSRSHCMPYSHQMHLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRTRRIAYKRCVTCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEDQDEKICIHHPSSRINE
YCRSDNQLLCAFCKIAFHNGHDTVSLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKEVRNGFLKLRAILQEKEKIIMEQIENLEVSRQKEIEKYVYITTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEEGIQNTFRPDPQLRLHSLHCIPLDFA
ELSNAIHELFPTGPKKACSSGDSLPSQYPIHSEMMIARKVTFSTHSFGNQQIYQRSSSLI
SFNTANDKGKMGLENYGRAQSAAPAKTTDGLYTYWSATGETQPPQSSNSFHNWYSFNDTS
VRTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTTPPNNVRTELCGQIRDIL
QQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSALQ
KRF

Region:1-723
Length:723aa
Label:Full sequence
Reset:click