Input sequence

Protein name Probable ATP-dependent RNA helicase DDX28
Organism Mus musculus Length 540
Disorder content 9.3% ProS content 4.8%
IDEAL NA UniProt Q9CWT6

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 540 1-22 23-31 32-34 35-49 50-62 63-112 113-116 117-125 126-537 538-540 23-31 35-49 63-112 126-537 1-22 32-34 50-62 117-125 538-540 1-22 34-34 538-540 150-521 127-516 154-338 426-490 152-340 416-492 140-505 123-506 8-18 42-58 4d25A(66-417) 8e-40 28.61% 1s2mA(2-354) 2e-74 26.2% PF00270(3-166) 4e-19 37.3% PF00271(10-74) 6e-10 43.08% PF00270 2.8e-45 161.0% PF00271 5.4e-28 103.6% 1pjrA1(3-314) 1e-29 9.29% c.37.1 2.4e-47 152.2%

Sequence

MALAGPSRLLALAVRLLLEPRRNLVVRGSDQSLPVVRVPRALQRRQEQRQSGRGSLQRPV
LVRPGPLLVSARRPELNQPARLTLGRWERAPLASRGWKHRRSRQDHFSIERVQQEAPALR
NLSSRGSFVDLGLEPRVLLALQEAVPEVVQPTSVQSKTIPPLLRGRHLLCAAETGSGKTL
SYLLPLFQRLLRGSDLDSRSFTAPRGLVLVPSRELAEQVQAVAQSLGGYLGLQVIELGGG
LGMSRLKLQLYRRPAADVLVATPGALWKALKSQLISLQHLNFIVLDEVDTLLDESFLELV
DYILEKSPIAESPAELEDPFNPKAQLVLVGATFPEGLNQLLSKVTSPDSLTTITSSKLHC
LMPHVRQTFMRLKGADKVTELVQILKQQDKASKTEPSGTVLVFCNSASTVNWLGYILDDH
KIQHLRLQGQMPASMRAGIFQSFQKGSQNILVCTDIASRGLDSVHVEVVINYDFPPTLQD
YIHRAGRVGRVGSEVPGSVISFVTHPWDVSLVQKIELAARRRRSLPGLASSVGDPLPQKA

Region:1-540
Length:540aa
Label:Full sequence
Reset:click