Input sequence

Protein name Transcription elongation factor SPT6-like
Organism Arabidopsis thaliana Length 1197
Disorder content 3.4% ProS content 1.4%
IDEAL NA UniProt Q9CAM1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1197 1-12 13-36 37-45 46-248 249-253 254-598 599-605 606-989 990-1002 1003-1197 13-36 46-248 254-598 606-989 1003-1197 1-12 37-45 599-605 990-1002 8-12 599-605 998-1002 57-887 1005-1155 50-898 1005-1197 223-490 780-866 891-965 524-656 698-766 887-965 1004-1112 30-39 148-165 991-1003 1057-1068 3psfA(8-798) 4e-51 23.66% 3pjpA(1-146) 6e-16 30.13% 3psfA(1-809) 7e-141 22.12% 3pjpA(1-190) 1e-41 26.67% 2oceA3(92-322) 1e-30 15.56% 2oceA2(2-71) 3e-09 22.99% 1sroA(5-76) 2e-05 21.33% 2oceA5(22-135) 6e-05 18.05% 3ci0K2(28-105) 0.0005 6.41% b.40.4 3.5e-07 26.3% d.93.1 5.6e-05 17.3%

Sequence

MRRKKMKYKQGTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPMVLSEK
YMTEKDDEIRKLDVPERMQIFEEAIGIVSLDDMSIQEESNWIYARLLQEQGQGCLINKDD
IVKFLEMFHVQKLEIPFIAMYRKEQCRSLLDSSDDDHDGSDFNLDKKLETKWHKVLWMIQ
DLDRKWVLLRKRKTALFGYYTKRFEEETCMSDLNKSLFESVIKSLQAAETEREVDDVDSK
FNLHFPHCEIDEGQYKRPNRKSQYSICSKFGIKEFANKFGYSAEQLGLALSLEKVFVDEL
EDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPSIRKYVRGIFMENAVVSTS
PTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEEEKLLQVTFKLPENQMNRI
ISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEKEARSLLTSRAKTQLLSEY
GQVLWNKVSSGPYRRNNNTSEEEAAPRVLACCWGPGNPETTFVMLDSSGELVDVLYSGSI
GLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLSCVRLKDEIYEAIFQMVEELP
LNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAGIVKRAVSLGRYLQNPLAMIST
LCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQVGIDINLAASHEWLFSPLQFV
SGLGPRKAASLQKSLVRAGSIFVRKELINHGIGKKVFVNAAGFLRIRRSGLACSSSQFID
LLDDTRIHPESYGLAQELAKDVYAHDTVRGDEDDAIEMAIEHVRDEPASLRKIVLDEYLR
SKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEEFYMISGETKETIGEGRIVQATVK
KVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNKLCEGDIVTCKVKSILKQRYHVLL
VCKESEMRKHRNLGDVDDYYHEEKRNSVLIEKEKVPKEKKQFKSRMIVHPRFQNITAEQA
TVYLSDKNIGESIVRPSSRGLNHLTLMIKISDNVYANKEIIEGEKENKDIVSLQRIGKTL
KIGNETFEDLDEVMDRYVDPLVTHLMTMLNHRKFRTGTKSEIDDLLRVEKGVNPKMVVYS
FGVSHEHPGSFILSYIRSANPHHEYIGLYPKGFKFRKRMFGDLDKLAAYFKRHIDNQ

Region:1-1197
Length:1197aa
Label:Full sequence
Reset:click