Input sequence

Protein name Pentatricopeptide repeat-containing protein At1g53600, mitochondrial
Organism Arabidopsis thaliana Length 717
Disorder content 1.4% ProS content 1.4%
IDEAL NA UniProt Q9C8L6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 717 1-10 11-717 11-717 1-10 1-10 143-446 402-601 54-208 53-601 82-116 178-212 240-273 342-376 404-438 505-539 477-703 212-413 54-253 407-511 50-336 339-645 625-637 4wslA(2-291) 3e-30 30.98% 4wslA(2-204) 3e-20 29.41% 4ozsA(6-173) 4e-14 32.54% 4m57A(108-662) 7e-51 17.22% PF01535 0.00032 24.6% PF01535 0.00076 23.4% PF01535 2.3e-06 31.8% PF01535 3.2e-06 31.3% PF01535 2.8e-10 44.8% PF01535 6e-09 40.3% 2fsqA1(2-230) 4e-36 8.97% 2fsqA1(2-214) 2e-21 4.19% 2fsqA1(2-220) 6e-21 4.09% 1nnvA(2-105) 4e-14 9.43% a.118.8 3.3e-14 44.6% a.118.8 6.7e-27 86.5%

Sequence

MVMRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKH
ARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMIT
AMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVAS
NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI
TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL
VSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEA
YELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYE
EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV
SMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGV
TFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIST
MPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDC
DRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMELI

Region:1-717
Length:717aa
Label:Full sequence
Reset:click