Input sequence

Protein name ATP-dependent RNA helicase DEAH13
Organism Arabidopsis thaliana Length 1237
Disorder content 31.1% ProS content 18.3%
IDEAL NA UniProt Q9C813

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1237 1-220 221-401 402-406 407-410 411-511 512-642 643-656 657-660 661-874 875-903 904-1237 221-401 411-511 643-656 661-874 904-1237 1-220 402-406 512-642 875-903 5-29 61-143 154-178 187-194 402-406 525-535 549-554 560-575 585-614 887-903 233-511 634-1082 262-505 681-868 1012-1089 801-880 1006-1079 244-430 641-735 796-921 955-1085 220-388 603-877 250-425 420-842 39-46 60-73 569-585 662-677 720-733 889-909 2xauA(83-329) 3e-45 37.63% 2xauA(324-718) 7e-34 30.35% 4cbgA(14-192) 3e-24 14.34% 4cbgA(215-398) 3e-16 22.11% 2xauA(650-725) 2e-06 26.92% PF04408(6-70) 6e-06 37.5% PF07717(29-105) 2e-05 35.06% PF00270 0.00031 -22.0% PF00271 6.5e-16 63.5% PF04408 8.8e-22 83.0% PF07717 9.5e-25 92.8% 1q1lA(14-195) 3e-27 14.21% 1hrkA(76-345) 3e-25 5.86% c.37.1 9.4e-34 111.3% c.37.1 1.4e-53 172.3%

Sequence

MASVVGDDCNLDVMPPRKKKNKGSNKMQDKLNSNNNTGSKKSRKRKLNSNVNTVACKSQK
RKLKKLEEDKEKEILFSKTAELLDKYKISEDVSSLLQSSKVIGRSATKLEKRRRAMQLSK
AGVETEHSDESVEQNDNDDDSCMDEPTTPEHVEIETPTFVTDSEQQLVHADLMISAEESS
SKLEVDDTVDMIPLTTCRDDDEDSMDGLIENEDVTVQGPRVPAFVVHVSRPAEVEETRKD
LPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQP
RRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRR
YSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLIL
MSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKK
LPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAYVKKKCDDGSFGGVDMKEIAE
AFDDDSNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDEDRDWETVDDGFASSFVEE
GKLDALRAAFNALADKNGSVSAEPAKSIAAENQEAEQVKNKFSPGKLRVLPLYAMLSPAA
QLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWIS
QASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKV
ENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPMSPRHSRMLLTVIQML
KETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDADKTVKQEDKQRKKDRK
EKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRL
VFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEEELLGEAICAGWADRV
ARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHGATRVRPEWLVK
HAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHNWELPAHSVAITEDRDRAAAFGC
ALLQGEVLTCLKSFRALLAGKPETLLEREAWGLERVGSLVMVLTEKKIDTLESLRKNWEQ
NPNVLYSEIEVWFQKKFRHRVKDLWQTMLKEAHVRRS

Region:1-1237
Length:1237aa
Label:Full sequence
Reset:click