Input sequence

Protein name Protocadherin-11 Y-linked
Organism Homo sapiens Length 1340
Disorder content 32.3% ProS content 23.7%
IDEAL NA UniProt Q9BZA8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1340 1-27 28-33 34-86 87-91 92-827 828-953 954-1007 1008-1143 1144-1150 1151-1275 1276-1291 1292-1311 1312-1320 1321-1340 1-27 34-86 92-827 954-1007 1144-1150 1276-1291 1312-1320 28-33 828-953 1008-1143 1151-1275 1292-1311 1321-1340 28-33 828-898 912-918 925-953 1008-1069 1083-1111 1116-1122 1127-1143 1161-1174 1184-1211 1234-1241 1259-1263 1268-1275 1296-1311 1331-1340 275-371 456-807 402-496 106-273 175-695 595-804 60-273 807-1005 503-593 286-368 611-696 723-791 176-271 56-146 56-148 176-272 286-378 398-489 503-593 607-696 714-805 807-1033 237-654 103-353 613-773 715-832 32-133 164-273 269-427 381-490 492-594 596-697 698-806 10-26 373-384 847-866 900-907 1007-1026 1149-1167 5-27 34-56 2ee0A(8-104) 1e-29 67.01% 3q2vA(66-437) 8e-28 29.63% 2ystA(23-119) 0.001 28.87% 3ppeA(45-203) 7e-10 30.11% 3q2wA(3-540) 2e-68 23.93% 2wcpA(2-204) 1e-35 27.1% 2wcpA(14-206) 4e-21 23.5% PF08374(1-192) 2e-33 52.74% PF00028(1-92) 1e-13 46.74% PF00028(1-80) 6e-08 44.58% PF00028(5-92) 8e-08 47.73% PF00028(11-79) 7e-06 44.93% PF00028(1-91) 0.0002 35.42% PF08266(1-82) 5e-10 37.36% PF08266 9.8e-06 1.6% PF00028 1.1e-09 42.7% PF00028 4.4e-26 97.3% PF00028 5.3e-06 30.5% PF00028 1.8e-21 82.0% PF00028 2.9e-24 91.2% PF00028 5e-14 57.2% PF08374 1e-167 567.7% 1dnvA(14-412) 8e-52 8.37% 2nlzA1(308-530) 2e-25 10.51% 1f15A(1-157) 4e-33 14.11% 1nkgA2(12-144) 2e-06 6.77% 1f5aA1(29-118) 1e-07 10.78% b.1.6 1.6e-24 90.6% b.1.6 1.1e-34 119.7% b.1.6 3.9e-18 63.7% b.1.6 1e-31 110.4% b.1.6 7.2e-30 104.1% b.1.6 4.3e-22 78.8%

Sequence

MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
YSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGL
PLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKEITVQPTVEEASDNCTQECLIYG
HSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIAL
CHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALCYSPPLAQAAAISHSSSLPQVIAL
HRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFA
PRQQARPSRGDSPIMETHPL

Region:1-1340
Length:1340aa
Label:Full sequence
Reset:click