Input sequence

Protein name Protocadherin-11 X-linked
Organism Homo sapiens Length 1347
Disorder content 34.4% ProS content 24.9%
IDEAL NA UniProt Q9BZA7

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1347 1-19 20-794 795-923 924-936 937-941 942-946 947-961 962-965 966-978 979-1085 1086-1090 1091-1124 1125-1128 1129-1133 1134-1150 1151-1156 1157-1285 1286-1327 1328-1347 20-794 924-936 947-961 966-978 1086-1090 1125-1128 1151-1156 1286-1327 1-19 795-923 937-941 962-965 979-1085 1091-1124 1134-1150 1157-1285 1328-1347 1-19 795-868 893-923 937-941 962-965 979-1009 1017-1035 1043-1055 1058-1073 1091-1124 1134-1150 1175-1180 1192-1209 1226-1232 1243-1247 1253-1270 1278-1285 1338-1347 243-339 418-775 370-464 74-241 143-663 563-772 28-241 775-973 471-561 254-336 579-664 691-759 144-239 367-456 24-114 24-116 144-240 254-346 366-457 471-561 575-664 682-773 775-1001 205-622 71-321 581-741 683-800 8-101 132-241 237-395 349-458 460-562 564-665 667-774 341-352 815-834 868-875 975-994 1156-1174 2ee0A(8-104) 1e-29 67.01% 3q2vA(60-437) 1e-25 28.65% 2ystA(23-119) 0.0005 28.87% 3ppeA(45-203) 7e-10 30.11% 3q2wA(3-540) 4e-68 24.11% 2wcpA(2-204) 3e-36 27.44% 2wcpA(14-206) 5e-22 22.94% PF08374(1-192) 1e-34 53.73% PF00028(1-92) 8e-13 45.65% PF00028(1-80) 6e-08 44.58% PF00028(5-92) 8e-08 47.73% PF00028(11-79) 7e-06 44.93% PF00028(1-91) 0.0002 35.42% PF00028(2-91) 0.0007 34.44% PF08266(1-82) 7e-10 37.36% PF08266 9.3e-06 1.8% PF00028 1.1e-09 42.7% PF00028 4.4e-26 97.3% PF00028 4.8e-07 34.0% PF00028 8.4e-20 76.4% PF00028 4.6e-25 93.9% PF00028 5e-14 57.2% PF08374 6.2e-174 588.4% 1dnvA(14-412) 8e-52 8.14% 2nlzA1(308-530) 2e-25 10.51% 1f15A(1-157) 4e-32 14.11% 1nkgA2(12-144) 3e-06 6.77% 1f5aA1(37-118) 1e-07 10.64% b.1.6 1.6e-24 90.6% b.1.6 1.1e-34 119.7% b.1.6 8.6e-19 66.0% b.1.6 1.2e-30 106.8% b.1.6 7.1e-30 104.1% b.1.6 4.6e-21 73.8%

Sequence

MDLLSGTYIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTA
MQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIK
SQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVT
DTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLF
HLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI
VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLET
AAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS
PGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTI
LAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
DNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVT
INVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNT
RDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT
LINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAP
HLKAAQKNKQNSEWATPNPENRQMIMMKKKKKKKKHSPKNLLLNFVTIEETKADDVDSDG
NRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSKH
HIIQELPLDNTFVACDSISKCSSSSSDPYSVSDCGYPVTTFEVPVSVHTRPPMKEVVRSC
TPMKESTTMEIWIHPQPQRKSEGKVAGKSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTS
TSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDNCT
QECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPP
VTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSP
LPQVIALHRSQAQSSVSLQQGWVQGADGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKV
IPLTTFTPRQQARPSRGDSPIMEEHPL

Region:1-1347
Length:1347aa
Label:Full sequence
Reset:click