Input sequence

Protein name Long-wave-sensitive opsin 1
Organism Bos taurus Length 364
Disorder content 14.3% ProS content 10.7%
IDEAL NA UniProt Q9BGI7

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 364 1-29 30-341 342-364 30-341 1-29 342-364 1-29 355-364 23-314 307-331 22-315 71-322 70-322 21-339 20-364 340-362 55-77 90-112 127-149 169-191 221-243 270-292 302-324 1f88A(4-294) 2e-13 21.69% 1fdfA(1-25) 3e-05 64.0% 1f88A(3-295) 2e-45 21.21% PF00001(1-253) 4e-26 28.68% PF00001 5.2e-45 160.1% 1f88A(2-319) 1e-26 40.99% f.13.1 4.9e-77 256.8%

Sequence

MAHAWGPQRLAGGQPQANFEESTQGSIFTYTNSNSTRDPFEGPNYHIAPRWVYHLTSAWM
VFVVIASVFTNGLVLAATMRFKKLRHPLNWILVNLAIADLAETIIASTISVVNQMYGYFV
LGHPLCVVEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAITGIAFSWIWA
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMITCCFIPLSVIILCYL
QVWLAIRAVAKQQKESESTQKAEKEVTRMVMVMIFAYCLCWGPYTFFACFAAAHPGYAFH
PLVAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSVSKTEASSVSS
VSPA

Region:1-364
Length:364aa
Label:Full sequence
Reset:click