Input sequence

Protein name Probable ATP-dependent RNA helicase DDX52
Organism Rattus norvegicus Length 598
Disorder content 30.3% ProS content 15.4%
IDEAL NA UniProt Q99PT0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 598 1-133 134-550 551-598 134-550 1-133 551-598 1-31 44-51 110-121 551-587 595-598 140-379 417-543 123-541 190-356 433-507 190-364 432-508 178-519 86-528 60-80 83-92 266-278 544-560 3dkpA(3-240) 3e-118 94.17% 4crwB(32-158) 3e-20 38.58% 4d25A(8-424) 1e-110 32.41% PF00270(1-160) 3e-24 41.67% PF00271(1-75) 6e-14 44.0% PF00270 4.8e-51 180.2% PF00271 3e-34 124.4% 1pjrA1(1-314) 2e-42 9.33% c.37.1 9.9e-56 179.4%

Sequence

MDSYDLFRRLGAGAKFDVKRFSADATRFQVGKRKFGSDSSETVKGLDFFGNKKSVSDECG
GLQTQQELQNEETTEGGLLERSKEPKKKKRKKMTADVPAQEDLDGTIQWTSSVEAKLQDK
KANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQN
ILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYD
VEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEQAKQKKVAGQNSKKKETLKGKS

Region:1-598
Length:598aa
Label:Full sequence
Reset:click