Input sequence

Protein name Protocadherin-15
Organism Mus musculus Length 1943
Disorder content 23.5% ProS content 13.5%
IDEAL NA UniProt Q99PJ1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1943 1-1402 1403-1516 1517-1538 1539-1582 1583-1610 1611-1862 1863-1897 1898-1943 1-1402 1517-1538 1583-1610 1863-1897 1403-1516 1539-1582 1611-1862 1898-1943 1403-1428 1447-1466 1473-1483 1491-1516 1539-1539 1548-1582 1611-1647 1657-1687 1693-1703 1712-1740 1831-1844 1898-1903 1922-1936 27-250 454-856 730-1148 305-490 1071-1249 27-250 730-1234 305-820 829-1252 146-392 529-596 744-815 157-261 519-611 626-713 728-815 829-922 936-1032 1046-1140 1154-1248 778-1186 282-686 600-891 84-244 155-356 1143-1247 146-262 286-392 394-506 508-612 615-714 715-816 818-923 925-1033 1037-1142 1143-1249 251-267 705-719 1381-1402 1423-1450 1661-1678 1740-1760 1767-1780 1784-1834 1380-1402 4apxB(2-225) 6e-130 100.0% 3q2wA(48-474) 6e-29 28.83% 1l3wA(7-439) 1e-21 25.4% 2o72A(3-195) 2e-08 24.63% 3lndA(30-197) 2e-11 32.42% 4apxB(2-225) 2e-81 100.0% 1l3wA(7-518) 6e-59 20.64% 1l3wA(3-535) 7e-50 22.6% 1l3wA(7-435) 3e-36 19.77% 2wcpA(3-206) 1e-14 22.8% PF00028(11-79) 0.0001 40.58% PF00028(18-92) 0.0001 49.33% PF00028 2.7e-10 44.8% PF00028 9.1e-11 46.4% PF00028 7.1e-18 70.0% PF00028 6.4e-23 86.7% PF00028 1e-14 59.5% PF00028 1.8e-11 48.7% PF00028 1.2e-13 55.9% PF00028 0.00099 23.0% 1dnvA(12-395) 8e-42 7.47% 2nlzA1(140-529) 3e-36 10.39% 2nlzA1(238-530) 3e-33 8.44% 1o75A3(10-154) 9e-16 12.96% 1nkgA2(4-171) 3e-09 8.74% 1edhA2(1-110) 1e-10 30.91% b.1.6 2e-21 75.0% b.1.6 9.5e-11 37.7% b.1.6 5.4e-16 56.4% b.1.6 1.7e-21 75.3% b.1.6 1.6e-22 78.8% b.1.6 3.3e-24 89.5% b.1.6 1.3e-23 82.6% b.1.6 7.8e-21 73.0% b.1.6 1.5e-16 59.3% b.1.6 5.5e-18 63.2%

Sequence

MFLQFAVWKCLPHGILIASLLVVSWGQYDDDWQYEDCKLARGGPPATIVAIDEESRNGTI
LVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIV
VQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNG
ATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN
DRAQNLNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEEL
NPILVTPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELTLLEPVNR
DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS
ESLNLTTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTPTGITRYLTLLQPVDREEQQ
TYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYVYTDMSPGDSVIQLTAVD
ADEGSNGEISYEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQASDNAPPAERR
HSICTVYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENG
DPQRVFNLSETTGILSLGKALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAP
VFDPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAV
KLNREARDHYELVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAG
TSFLQIEAKDVDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFL
VEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADP
PGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEPV
MSSSATVRILVLHPGEIPRFTQEEYRPPPVSELAARGTVVGVISAAAINQSIVYSIVAGN
EEDKFGINNVTGVIYVNSPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQ
DENDHPPVFQKKFYIGGVSEDARMFASVLRVKATDRDTGNYSAMAYRLIIPPIKEGKEGF
VVETYTGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNV
PPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAYSLEDYSKCDLTVYAIDP
QTNRAIDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEG
ALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQSAMPAAKPAAPVPAAPAPP
PPPPPPPPGAHLYEELGESAMHNLFLLYHFEQSRGNNSVPEDRSSHRDGMAFSSSTTESH
EPAHVEGPLKESQPNPARTFSFVPDEDNLSTHNPLYMESIGQRSTNSDLQPRTDFEELLA
PRTQVKSQSLRGPREKIQRVWNQSVSFPRRLMWKAPNRPETIDLVEWQITNQRAECESAR
CHPSQRGSSNVLLATEDAHESEKEGGHRDTLIVQQTEQLKSLSSGSSFSSSWSHFSFSTL
PTISRAVELGSEPNVVTSPADCTLELSPPLRPRILNSLSSKRETPTCASDTEPKRNSFEI
APHPPSISAPLPHPPLPRPPIAFTTFPLPLSPPNPPPPQLVTFSLPISTPPTSSLPLPPP
LSLPPPPRPPAPRLFPQPPSTSIPSTDSISAPAAKCTASATHARETTSTTQPPASNPQWG
AEPHRHPKGILRHVKNLAELEKSVSNMYSHIEKNCPPADPSKLHTFCPAEKTGMKITHDQ
SQETLVRVVEGIDVQPHSQSTSL

Region:1-1943
Length:1943aa
Label:Full sequence
Reset:click