Input sequence

Protein name Collagen alpha-1(XII) chain
Organism Homo sapiens Length 3063
Disorder content 21.9% ProS content 14.6%
IDEAL NA UniProt Q99715

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3063 1-26 27-100 101-106 107-139 140-231 232-237 238-321 322-336 337-415 416-438 439-518 519-536 537-620 621-637 638-718 719-723 724-807 808-812 813-899 900-913 914-989 990-997 998-1077 1078-1095 1096-1126 1127-1136 1137-1153 1154-1157 1158-1164 1165-1183 1184-1188 1189-1275 1276-1279 1280-1292 1293-1297 1298-1377 1378-1392 1393-1470 1471-1471 1472-1477 1478-1741 1742-1753 1754-2018 2019-2022 2023-2154 2155-2159 2160-2201 2202-2208 2209-2279 2280-2285 2286-2300 2301-2414 2415-2423 2424-2471 2472-2476 2477-2503 2504-2527 2528-2694 2695-3063 27-100 140-231 238-321 337-415 439-518 537-620 638-718 724-807 813-899 914-989 998-1077 1096-1126 1137-1153 1158-1164 1189-1275 1280-1292 1298-1377 1393-1470 1478-1741 1754-2018 2023-2154 2160-2201 2209-2279 2301-2414 2424-2471 2477-2503 2528-2694 1-26 107-139 232-237 322-336 416-438 519-536 621-637 719-723 808-812 900-913 990-997 1078-1095 1154-1157 1165-1183 1276-1279 1378-1392 1471-1471 1742-1753 2019-2022 2202-2208 2286-2300 2415-2423 2504-2527 2695-3063 1-14 107-113 131-139 416-421 432-438 519-529 808-812 900-903 910-913 990-997 1078-1086 1092-1095 1154-1157 1176-1183 1276-1279 1387-1392 1471-1471 1742-1746 2019-2022 2202-2208 2286-2293 2510-2527 2701-2713 2748-2898 2920-2940 2952-2990 2995-3063 1487-1845 631-894 1944-2285 823-1175 1752-2114 2508-2724 140-308 1197-1367 430-616 2314-2496 1384-1563 339-422 140-318 438-617 1196-1376 2320-2503 2508-2724 1385-1647 725-901 816-993 2028-2202 1657-1841 634-810 907-1083 1569-1743 349-422 1752-2114 1002-1176 2118-2290 19-111 140-288 2323-2472 440-604 1199-1347 815-892 25-103 140-312 334-416 440-612 632-710 723-802 813-895 904-987 995-1077 1087-1166 1199-1371 1385-1463 1474-1554 1566-1643 1654-1732 1752-1836 1844-1926 1934-2016 2024-2108 2116-2193 2204-2281 2323-2496 2747-2806 2824-2883 2931-2989 2990-3047 134-318 431-617 2322-2501 1196-1376 2520-2721 1487-1676 1384-1474 1089-1177 724-810 1012-1075 2133-2195 830-894 350-415 1938-2022 2028-2113 906-993 634-719 1754-1832 1656-1728 2087-2157 26-112 133-318 335-424 431-618 632-719 724-810 815-902 905-993 1001-1084 1087-1179 1192-1377 1386-1474 1469-1563 1565-1652 1656-1745 1752-1841 1843-1931 1935-2024 2024-2113 2116-2202 2209-2294 2317-2507 2505-2707 5-18 69-89 324-338 1907-1931 2294-2313 2747-2768 2771-2798 2817-2842 2851-2878 2941-2972 2990-3042 1fnfA(5-363) 1e-35 30.24% 1fnfA(94-355) 2e-26 30.6% 1fnfA(13-359) 1e-21 27.43% 3t1wA(12-365) 3e-28 28.33% 3t1wA(1-366) 5e-15 24.73% 2uurA(3-210) 3e-25 31.8% 1pt6A(3-182) 2e-22 36.81% 4igiA(1-171) 5e-22 37.36% 4nehA(125-314) 2e-19 33.85% 4nehA(123-310) 4e-17 28.27% 2geeA(7-188) 6e-15 29.03% 4u3hA(19-100) 9e-06 34.52% 1lfaA(4-181) 1e-52 26.11% 1lfaA(2-180) 1e-50 24.86% 1lfaA(1-180) 1e-47 20.33% 1lfaA(1-182) 1e-46 22.16% 2uurA(3-210) 9e-42 31.8% 1tdqA(4-267) 4e-27 22.26% 1qr4A(2-175) 5e-27 26.55% 1qr4A(2-175) 9e-26 28.09% 1qr4A(3-175) 3e-23 27.84% 1qr4A(2-175) 4e-22 24.86% 1qr4A(2-175) 1e-20 27.68% 1qr4A(2-175) 2e-19 25.99% 1qr4A(3-175) 6e-19 24.57% 1qr4A(103-175) 9e-10 29.73% 3t1wA(1-366) 4e-23 23.1% 2ha1A(8-201) 9e-22 22.16% 2geeA(10-188) 2e-12 27.93% 2ee3A(2-94) 0.0004 22.58% PF00092(1-148) 1e-16 37.25% PF00092(1-148) 6e-12 35.71% PF00092(1-162) 8e-12 31.36% PF00092(1-148) 4e-11 32.68% PF00041(1-82) 0.0007 40.24% PF00041 1.2e-17 69.3% PF00092 1.6e-70 244.9% PF00041 3.3e-17 67.8% PF00092 1.5e-66 231.7% PF00041 1.1e-14 59.4% PF00041 9.1e-17 66.3% PF00041 3e-17 67.9% PF00041 2.9e-09 41.4% PF00041 6.2e-13 53.6% PF00041 3.8e-10 44.3% PF00092 2.6e-72 250.8% PF00041 8.6e-21 79.7% PF00041 3.3e-15 61.1% PF00041 2.5e-15 61.5% PF00041 1.3e-13 55.9% PF00041 3.5e-21 81.0% PF00041 2.6e-13 54.8% PF00041 3e-15 61.3% PF00041 3.6e-17 67.7% PF00041 6.9e-19 73.3% PF00041 1.9e-09 42.0% PF00092 8.3e-65 225.9% PF01391 7.5e-06 28.1% PF01391 3.9e-13 54.2% PF01391 1.5e-05 22.7% PF01391 0.00018 2.4% 1aoxA(1-196) 7e-37 27.78% 1ao3A(1-187) 7e-35 18.32% 1ao3A(5-187) 4e-34 22.83% 1cqpA(1-180) 9e-34 21.43% 1z78A1(3-205) 2e-16 16.11% 1cfmA1(2-184) 5e-13 13.4% 1j8kA(1-93) 3e-11 27.96% 1j8kA(4-92) 1e-07 30.34% 1fnhA2(3-89) 3e-11 24.14% 1q38A(1-65) 5e-11 26.15% 1q38A(2-66) 9e-11 26.15% 1q38A(1-66) 9e-08 22.73% 1q38A(1-66) 2e-07 13.64% 1fnfA3(5-89) 1e-10 25.88% 1fnfA3(4-89) 2e-08 26.74% 1fnfA3(2-89) 1e-07 26.14% 1fnfA3(3-89) 3e-07 25.29% 1fnfA2(2-81) 5e-10 30.0% 1qg3A1(3-75) 5e-07 21.92% 1n98.1(3-85) 5e-05 9.64% b.1.2 2.3e-15 49.8% c.62.1 5.1e-63 209.2% b.1.2 5.7e-20 64.6% c.62.1 7.1e-59 195.4% b.1.2 2.1e-16 56.7% b.1.2 2e-20 66.0% b.1.2 1.6e-19 63.1% b.1.2 1.4e-18 64.0% b.1.2 6.8e-18 57.7% b.1.2 3e-19 66.4% c.62.1 1.9e-58 194.0% b.1.2 8e-21 67.3% b.1.2 3e-19 64.0% b.1.2 7.6e-22 75.2% b.1.2 4.1e-15 49.0% b.1.2 3e-22 76.6% b.1.2 7.8e-18 61.5% b.1.2 3.8e-21 68.4% b.1.2 4.5e-20 69.2% b.1.2 4.2e-20 69.3% b.1.2 2.5e-14 46.2% c.62.1 2.9e-57 187.1% b.29.1 4.3e-08 24.1%

Sequence

MRSRLPPALAALGAALLLSSIEAEVDPPSDLNFKIIDENTVHMSWAKPVDPIVGYRITVD
PTTDGPTKEFTLSASTTETLLSELVPETEYVVTITSYDEVEESVPVIGQLTIQTGSSTKP
VEKKPGKTEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIAALVSAFDIGEEKTRVG
VVQYSSDTRTEFNLNQYYQRDELLAAIKKIPYKGGNTMTGDAIDYLVKNTFTESAGARVG
FPKVAIIITDGKSQDEVEIPARELRNVGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVVEPPSNLIAMEVSSKYVKLNWNPSPSP
VTGYKVILTPMTAGSRQHALSVGPQTTTLSVRDLSADTEYQISVSAMKGMTSSEPISIME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLVKSFEISPNRVQIS
LVQYSRDPHTEFTLKKFTKVEDIIEAINTFPYRGGSTNTGKAMTYVREKIFVPSKGSRSN
VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPAETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDLSFSEVTSYGFKTNWSPAGENVF
SYHITYKEAAGDDEVTVVEPASSTSVVLSSLKPETLYLVNVTAEYEDGFSIPLAGEETTE
EVKGAPRNLKVTDETTDSFKITWTQAPGRVLRYRIIYRPVAGGESREVTTPPNQRRRTLE
NLIPDTKYEVSVIPEYFSGPGTPLTGNAATEEVRGNPRDLRVSDPTTSTMKLSWSGAPGK
VKQYLVTYTPVAGGETQEVTVRGDTTNTVLQGLKEGTQYALSVTALYASGAGDALFGEGT
TLEERGSPQDLVTKDITDTSIGAYWTSAPGMVRGYRVSWKSLYDDVDTGEKNLPEDAIHT
MIENLQPETKYRISVFATYSSGEGEPLTGDATTELSQDSKTLKVDEETENTMRVTWKPAP
GKVVNYRVVYRPHGRGKQMVAKVPPTVTSTVLKRLQPQTTYDITVLPIYKMGEGKLRQGS
GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVVGPYDN
TVVLEELRAGTTYKVNVFGMFDGGESSPLVGQEMTTLSDTTVMPILSSGMECLTRAEADI
VLLVDGSWSIGRANFRTVRSFISRIVEVFDIGPKRVQIALAQYSGDPRTEWQLNAHRDKK
SLLQAVANLPYKGGNTLTGMALNFIRQQNFRTQAGMRPRARKIGVLITDGKSQDDVEAPS
KKLKDEGVELFAIGIKNADEVELKMIATDPDDTHAYNVADFESLSRIVDDLTINLCNSVK
GPGDLEAPSNLVISERTHRSFRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRMETSTV
LKDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSLNIYDVGPTTMHVQWQPVGGA
TGYILSYKPVKDTEPTRPKEVRLGPTVNDMQLTDLVPNTEYAVTVQAVLHDLTSEPVTVR
EVTLPLPRPQDLKLRDVTHSTMNVFWEPVPGKVRKYIVRYKTPEEDVKEVEVDRSETSTS
LKDLFSQTLYTVSVSAVHDEGESPPVTAQETTRPVPAPTNLKITEVTSEGFRGTWDHGAS
DVSLYRITWAPFGSSDKMETILNGDENTLVFENLNPNTIYEVSITAIYPDESESDDLIGS
ERTLPILTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITYQPSTGEGNEQTTT
IGGRQNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTSTL
NVRWDHAEGNPRQYKLFYAPAAGGPEELVPIPGNTNYAILRNLQPDTSYTVTVVPVYTEG
DGGRTSDTGRTLMRGLARNVQVYNPTPNSLDVRWDPAPGPVLQYRVVYSPVDGTRPSESI
VVPGNTRMVHLERLIPDTLYSVNLVALYSDGEGNPSPAQGRTLPRSGPRNLRVFGETTNS
LSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVILQPLQPDTPYKITVIAVYE
DGDGGHLTGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEPME
AFVGEMTSYTLHNLNPSTTYDVNVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQIGWDTF
CVKWSPHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTGLSPDTDYGVTVFVQTPNLE
GPGVSVKEHTTVKPTEAPTEPPTPPPPPTIPPARDVCKGAKADIVFLTDASWSIGDDNFN
KVVKFIFNTVGGFDEISPAGIQVSFVQYSDEVKSEFKLNTYNDKALALGALQNIRYRGGN
TRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAALVIQQSGFSVFVVGV
ADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTSPG
FKMLEAYNLTEKNFASVQGVSLESGSFPSYSAYRIQKNAFVNQPTADLHPNGLPPSYTII
LLFRLLPETPSDPFAIWQITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTEEV
KTLFYGSFHKVHIVVTSKSVKIYIDCYEIIEKDIKEAGNITTDGYEILGKLLKGERKSAA
FQIQSFDIVCSPVWTSRDRCCDIPSRRDEGKCPAFPNSCTCTQDSVGPPGPPGPAGGPGA
KGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGEPGLP
GRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPGSPGVTGPSGKPGKPGDH
GRPGPSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMNRFNQMLNQIPNDYQSSRNQ
PGPPGPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGTGSSGPRGLP
GPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCASIPYNGQGYP
GSG

Region:1-3063
Length:3063aa
Label:Full sequence
Reset:click