Input sequence

Protein name Voltage-dependent L-type calcium channel subunit alpha-1D
Organism Mus musculus Length 2179
Disorder content 34.7% ProS content 18.4%
IDEAL NA UniProt Q99246

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2179 1-101 102-218 219-223 224-230 231-448 449-521 522-809 810-875 876-1315 1316-1328 1329-1645 1646-2075 2076-2113 2114-2179 102-218 231-448 522-809 876-1315 1329-1645 2076-2113 1-101 224-230 449-521 810-875 1316-1328 1646-2075 2114-2179 1-38 50-61 449-454 466-479 499-521 819-831 860-875 1646-1685 1697-1711 1742-1745 1768-1781 1796-1804 1823-1840 1860-1878 1886-1899 1922-1929 1939-1950 1957-1962 1981-2028 2038-2043 2051-2063 2071-2075 2114-2127 2133-2151 2164-2179 1568-1642 420-448 1567-1642 1485-1594 413-448 164-405 1259-1483 581-770 942-1133 1618-1645 163-405 577-771 941-1171 1259-1483 1558-1675 1221-1353 540-649 122-267 902-996 75-414 507-796 836-1180 1212-1487 1484-1644 1-10 54-67 451-460 523-537 655-666 669-687 786-801 839-860 999-1013 1148-1162 1400-1408 1684-1696 1757-1763 1865-1875 1920-1940 1956-1971 2157-2168 768-809 130-149 164-186 199-218 272-294 351-373 383-405 539-561 581-603 670-692 746-768 902-924 944-966 973-992 1035-1057 1151-1173 1218-1240 1260-1279 1369-1388 1461-1483 3g43E(2-68) 8e-27 82.67% 4deyB(1-29) 7e-10 100.0% 3g43E(1-68) 6e-20 81.58% 2kavA(1-106) 1e-17 25.23% 4dexB(1-36) 1e-09 50.0% PF00520(2-198) 4e-36 38.84% PF00520(1-198) 2e-25 30.9% PF00520(5-197) 7e-18 37.19% PF00520(2-170) 1e-16 34.34% PF08763(1-28) 8e-10 96.43% PF00520 1.3e-72 251.8% PF00520 1.1e-60 212.2% PF00520 4.1e-68 236.9% PF00520 2.1e-75 261.1% 2ffjA1(27-148) 3e-19 15.32% 1orsC(2-115) 5e-16 8.21% 1orsC(3-108) 3e-11 14.41% 1orsC(2-125) 7e-10 13.7% 1orsC(2-91) 1e-05 9.47% f.14.1 7.2e-38 131.6% f.14.1 3.4e-32 111.8% f.14.1 2.4e-33 115.8% f.14.1 2.9e-34 119.0% a.39.1 0.0003 14.3%

Sequence

MMMMMMMKKMQHQRQHQEDHANEANYARGTRLPISGEGPTSQPNSSKQTVLSWQAAIDAA
RQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACI
SIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKI
IAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKT
CFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS
GEGETQGCCGTLWCWWKRRGAAKTGPSGCRRWGQAISKSKLSRRWRRWNRFNRRRCRAAV
KSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQ
AYFVSLFNRFDCFVVCGGITETILVELELMSPLGVSVFRCVRLLRIFKVTRHWTSLSNLV
ASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQ
ILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAES
LNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYQEDAEDKDPYPP
CDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCH
KLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTT
FGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFI
LYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGP
VYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDIL
NMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPSESETIPLP
TATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAML
FFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKL
CDPDSDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPH
HLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNS
DGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDE
VTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAISC
DLQDDEPEDSKPEEEDVFKRNGALLGNHVNHVNSDRRDSLQQTNTTHRPLHVQRPSMPPA
SDTEKPLFPPAGNSGCHNHHNHNSIGKQAPTSTNANLNNANMSKAAHGKPPSIGNLEHVS
ENGHYSCKHDRELQRRSSIKRTRYYETYIRSESGDEQFPTICREDPEIHGYFRDPRCLGE
QEYFSSEECCEDDSSPTWSRQNYNYYNRYPGSSMDFERPRGYHHPQGFLEDDDSPTGYDS
RRSPRRRLLPPTPPSHRRSSFNFECLRRQSSQDDVLPSPALPHRAALPLHLMQQQIMAVA
GLDSSKAQKYSPSHSTRSWATPPATPPYRDWSPCYTPLIQVDRSESMDQVNGSLPSLHRS
SWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYARDPKFVS
ATKHEIADACDLTIDEMESAASTLLNGSVCPRANGDMGPISHRQDYELQDFGPGYSDEEP
DPGREEEDLADEMICITTL

Region:1-2179
Length:2179aa
Label:Full sequence
Reset:click