Input sequence

Protein name Protein patched homolog 1
Organism Danio rerio Length 1220
Disorder content 16.8% ProS content 12.4%
IDEAL NA UniProt Q98864

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1220 1-27 28-527 528-528 529-598 599-717 718-730 731-740 741-1038 1039-1042 1043-1176 1177-1220 28-527 529-598 718-730 741-1038 1043-1176 1-27 528-528 599-717 731-740 1039-1042 1177-1220 5-22 528-528 599-601 611-670 682-717 731-740 1039-1042 1177-1183 1209-1220 783-863 955-1142 371-597 95-1169 1020-1137 228-339 380-582 973-1169 157-170 450-477 558-569 624-641 657-671 732-754 1144-1170 1184-1194 85-104 420-442 452-474 529-551 556-578 741-760 1016-1038 1043-1065 1069-1091 1112-1131 1141-1163 1zmbA(174-263) 1e-06 27.78% PF02460(399-584) 6e-30 40.0% PF02460(18-241) 6e-27 40.53% PF02460 2.1e-09 -165.3% 1iwgA7(44-165) 1e-13 10.66% 1ul1X1(14-125) 5e-07 17.07% f.35.1 5e-21 75.7% f.35.1 5.2e-22 79.2%

Sequence

MASDPRDPGPAGGVFGDLPPSYTRSPPPVNSDLLRRPSYCHAAFALKQISKGKAVGQKAP
LWIRARFQAFLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEKLWVEAGSRV
SKELRYTKEKQGEESVFTSQMLIQTPKQEGTNILTQEALLLHLEAALSASKVQVSLYGKS
WDLNKICFKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGSKLQGGSAYLPGMPDIQW
MNLDPLKLMEELSQFTSLEGFREMLDKAQVGHAYMNRPCLDPSDTDCPHSAPNKDPWQVP
NIAAELQGGCHGFSKKFMHWQEELILGERVKDSQNALQSAEALQTMFLLMSPKQLYEHFK
DDYEIHDINWNEDKATAILESWQRKFVEVVHGSIPQNSSSNVYAFSTTTLNDIMKSFSDV
SVIRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNA
ATTQVLPSLALGIGVDDMFLLGHSFTETRSNIPFKERTGDCLRRTGTSVALTSVNNMIAF
FMAALVPIPALRAFSLQAAVVVVFNFAMALLIFPAILSLDLHRREDKRLDILCCFYSPCS
SRVIQIQPQELSDANDNHQRAPATPTYTGSTITTSTHITTTVQAFTQCDAAGQHIVTILP
PTSQISTTPPSMVLSTPTPTTDPYGSQVFTTSSSTRDLLAQVEEPKEGRECVPLPFFRWN
LSSFAREKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTQEYEFI
TAQFKYFSFYNMYLVTMDGFDYARSQRQLLQLHNAFNSVKYVVKDGNHKLPRMWLHYFQD
WLKGLQATFDADWEAGKITYDSYRNGTEDGALAYKPLIQTGSKKEPFNYSQLTSRRLVDG
DGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYDTTGENLRIPAAEPLEF
AQFPFYLNGLRQASDFIEAIESVRTICEEFMRQGIKNYPNGYPFLFWEQYIGLRHWFLLS
ISVVLACTFLVCAILLLNPWTAGVIVFILPMMTVELFGIMGLIGIKLSAIPVVILIASVG
IGVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDGAISTLLGVLMLAGSEFDFIMRY
FFAVLAILTLLGILNGLVLLPVLLSLMGPPAEVVPANNANHLQSPSPEPMPPPMNHHGYY
AGHIPKASHQAFSETSDSEY

Region:1-1220
Length:1220aa
Label:Full sequence
Reset:click