Input sequence

Protein name Paired amphipathic helix protein Sin3a
Organism Homo sapiens Length 1273
Disorder content 33.4% ProS content 8.2%
IDEAL NA UniProt Q96ST3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1273 1-120 121-202 203-300 301-335 336-459 460-643 644-647 648-761 762-769 770-837 838-874 875-1029 1030-1034 1035-1118 1119-1152 1153-1269 1270-1273 121-202 301-335 460-643 648-761 770-837 875-1029 1035-1118 1153-1269 1-120 203-300 336-459 762-769 838-874 1119-1152 1270-1273 1-12 336-344 362-382 762-769 838-854 863-874 1119-1139 1148-1152 295-383 453-527 120-189 295-383 453-527 120-189 551-650 141-187 322-381 141-187 322-381 477-523 550-650 299-384 120-191 114-189 295-383 454-527 98-119 217-248 267-282 431-448 833-846 914-929 1134-1150 896-923 1g1eB(1-89) 3e-46 100.0% 2ld7B(1-75) 2e-35 96.0% 2rmrA(2-71) 2e-34 100.0% 1g1eB(1-89) 2e-33 100.0% 2ld7B(1-75) 2e-29 96.0% 2rmrA(2-71) 6e-25 100.0% PF08295(2-101) 2e-32 64.0% PF02671(1-47) 2e-09 55.32% PF02671(1-47) 7e-07 43.33% PF02671 4.1e-19 74.1% PF02671 1.2e-12 52.7% PF02671 1.8e-12 52.0% PF08295 3.6e-57 200.5% 1e91A(2-84) 1e-14 59.3% 1e91A(4-85) 3e-14 28.05% a.59.1 3.1e-24 88.1% a.59.1 2.7e-25 91.9% a.59.1 3.1e-15 56.2%

Sequence

MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAMPQSSGSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHPTGTTPPVKKKPKLLNLKDSSMADASKHGGGTESLFFDKVRKALRSAEAY
ENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETYPKERATE
GIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSS
KKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGT
SEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQ
NEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSLA
YEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEEE
EMDVDEATGAVKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLHQ
ILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYYP
AFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQV
TDLYLAENNNGATGGQLNTQNSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIE
LLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRGR
EQQEKEGKEGNSKKTMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSHE
RVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSIN
KYRVKYGTVFKAP

Region:1-1273
Length:1273aa
Label:Full sequence
Reset:click