Input sequence

Protein name Probable ligand-gated ion channel 46
Organism Caenorhabditis elegans Length 508
Disorder content 33.3% ProS content 25.0%
IDEAL NA UniProt Q95Y52

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 508 1-61 62-364 365-472 473-508 62-364 473-508 1-61 365-472 1-25 31-61 365-367 391-433 438-456 467-472 98-335 98-368 69-241 66-271 278-501 73-271 64-271 271-505 4-14 86-97 273-295 302-321 336-358 483-505 4cofA(47-282) 7e-27 27.16% 4x5tA(23-282) 4e-47 19.19% PF02931(3-175) 9e-16 27.53% PF02931 4.1e-57 200.3% PF02932 4e-13 54.2% 1i9bA(6-205) 2e-22 15.38% b.96.1 1.6e-51 176.6% f.36.1 1.6e-38 139.0%

Sequence

MQYLQFLSLVVLLLMCHARKSVYRRNSPSLRRLTRNYDWEVDEHGGLKPIINPAKVERAT
KNCANDSFILGTIMSNYNRHKIPGGQVDVEVEVWVQEITTISDITSDFQLDIYIYETWYD
PALNYAFMNPCKYNLSLNSVLLEKLWTPNSCFINSKTADIHKSPFPNIFLMIYANGTVWT
NYRLKLQGPCIMDLTKFPFDNVTCSLTFESFNYNTDEVKMDWSVNGVQKMRDKMELADYE
LVDIHKIRTTEEYPAGYWHELTMSFEFKRRAGWYILQAYLPTYLTICISWISFALGSKAI
PARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAIDVWMLSCMTFVFCSLLELAWVGYLSR
EEEPTSAKCLQPSAQVAPKPCHPPPVQQNANNSSVHRRQKQPKNEEESALLSLRDNDYGY
IPPGFGLNGNVANAMKSFSSSCSCEPTNVVNLMLDEAETIPTSTSSSLSRKQRREILAHK
IDSVSVFMFPFLFVLFNIAYWQHYLRGY

Region:1-508
Length:508aa
Label:Full sequence
Reset:click