Input sequence

Protein name Collagen alpha-1(XX) chain
Organism Mus musculus Length 1320
Disorder content 27.8% ProS content 22.7%
IDEAL NA UniProt Q923P0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1320 1-27 28-102 103-106 107-111 112-159 160-360 361-371 372-634 635-645 646-735 736-739 740-1039 1040-1320 28-102 107-111 160-360 372-634 646-735 740-1039 1-27 112-159 635-645 1040-1320 1-19 112-115 150-159 635-645 1040-1219 1233-1250 1257-1264 1272-1320 552-647 749-831 479-557 177-355 832-1047 375-458 647-731 175-354 832-1047 551-647 647-827 646-826 378-552 1125-1221 177-325 177-349 375-456 465-543 555-636 644-724 737-817 1068-1126 1165-1224 173-353 839-1044 754-828 660-732 539-643 373-454 479-544 30-101 171-360 374-462 464-552 555-641 645-732 739-827 826-1059 460-478 733-748 1067-1121 1140-1153 1168-1187 2ee3A(5-101) 4e-33 71.13% 2ekjA(19-100) 4e-26 71.08% 2dkmA(23-101) 5e-25 68.35% 4igiA(3-181) 2e-17 32.97% 2uurA(2-210) 1e-14 25.46% 3teuA(2-86) 7e-07 37.65% 3ch8A(104-189) 1e-05 33.72% 1lfaA(2-180) 4e-50 24.86% 2uurA(2-210) 1e-36 25.0% 2ee3A(4-101) 2e-24 70.41% 2ha1A(3-201) 1e-19 22.11% 1qr4A(2-175) 2e-17 24.31% 1qr4A(3-175) 4e-17 24.57% 2pneA(8-81) 4e-05 30.93% PF00092(1-148) 4e-14 33.55% PF00092 1.9e-67 234.7% PF00041 8.3e-12 49.8% PF00041 1.5e-13 55.6% PF00041 9.9e-08 36.3% PF00041 5e-11 47.2% PF00041 4.2e-15 60.8% PF01391 9.9e-06 25.9% PF01391 2.4e-14 58.3% 1ao3A(2-183) 3e-34 28.02% 1z78A1(2-205) 2e-19 15.57% 1q38A(1-75) 5e-12 16.0% 1q38A(1-72) 9e-06 25.68% 1wfoA1(5-116) 5e-08 19.64% 1fnhA2(1-81) 1e-07 20.73% 2ibbA1(21-87) 6e-06 14.93% b.1.2 7.2e-07 22.0% c.62.1 2e-60 197.4% b.1.2 2e-18 63.6% b.1.2 1.7e-16 56.9% b.1.2 8.1e-13 44.4% b.1.2 1.3e-12 41.0% b.1.2 1.1e-20 66.8% b.29.1 1.7e-08 25.3%

Sequence

MSLQGSYQHFCLWMFLGTTLALGQGQVSSRLRLAVLPEDQLQMKWREAEGSGLGFLVQVT
PMAGDLEQELILTTKTPKATVGGLNPSKSYTLQIFELTDSGPILLARREFVIEDLKSQSL
GRGSRRLAGATLEPTSLPLRGPDSEKTSEPSIAFTLSRDLPILDHPQFQCTPPTPADIIF
LVDGSWSIGHNHFQQVKDFLASIITQFAIGPDKVQVGLTQYSGDPQTEWDLNSFQTKEQV
LAAVHHLRYKGGNTFTGLALTHVLEQNLKPAAGVRPEAAKVLILVTDGKSQDDVRTAARI
LKDQDIDVFVVGVKNVDEAELKLLASQPLDITVHNVLDFPQLDTLAPLLSRLICQKIQGR
GPVKPAAGTRVLDPLPTPTRLILTHATSSSIHLSWTPALYPPLKYLIVWQPSRGGAPKEV
VVEGPVSSMELGNLTSSTEYLVSVLPVYESGVGKSLQGRATTAPLPPPGPLTLAAVTPRT
LHVTWPPSAGVTQYLVQYLLATSTGEEQKREVHVGQPEVLLDGLEPGQDYDVSVQSLRGP
EASEVQSIRARTSALGPPRHLTFSDVRYNSTCVSWEAQRPVRLVKVSYISSDGSHSGQTQ
VPGNLTSATLGPLSSSTMYTVRVTCFYLGGGSSVLTGHVTTQKAPSPGQLSVMELPGDAV
KLSWLATALSGVLVYQIKWMPLGEGKAREISVPGTLGTATLPGLMKHVEYEITILAYYRD
GTRSDPVSLRYTPSAASRSPPSSLALSSETPNSLQVNWTPPSGHVLHYRLNYTLASGSGP
EKSISVPGTRSHAVLRDLMSATKYRVLVSAVYRAGESMAVSATYRTAACPALHPDSSLSG
FDLMVAFGLVAKEYASIRGVAMEPSALGVVPTFTLFKDAQLMRRVSDIYPATLPPEHTIV
FLVRLLPETPREAFALWQMMAEDFQPILGVLLDAGRKSLTYFNHDSRAALQEVTFDLQDA
KKIFFGSFHKVHIAVGHSKVRLYVDCRKVAERPIGDAGSPPTGGFITLGRLAKARGPRSS
SATFQLQMLQIVCSDTWADKDRCCEIPALRDGETCPAFPSACAYSSETPGPPGPQGPPGL
PGRNGPPGQQGHPGPKGEPGPPGQTGPEGPGGQQGSPGTQGRAVQGPMGPPGAKGEKGDQ
GLSGLQGLSGQQGIPGKTGLQGPKGMRGLEGPAGLPGPPGPRGFQGLAGARGTNGERGAP
GAVGPTGLPGSKGERGEKGEPQSLATIFQLVSQACESAIRTHVLKLNSFLHENARPPMPF
MAETAKLGRPRSIDPGLHNEALLPGDWGHILRPEDQGEPVTISHTSNPRLQEVQTPESLE

Region:1-1320
Length:1320aa
Label:Full sequence
Reset:click