Input sequence

Protein name Protocadherin alpha-9
Organism Mus musculus Length 979
Disorder content 18.5% ProS content 16.4%
IDEAL NA UniProt Q91Y11

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 979 1-11 12-24 25-40 41-706 707-720 721-756 757-763 764-806 807-893 894-933 934-979 12-24 41-706 721-756 764-806 894-933 1-11 25-40 707-720 757-763 807-893 934-979 1-11 25-27 34-40 757-763 807-893 934-979 57-159 224-600 507-705 157-270 182-696 57-159 60-141 385-475 491-585 279-371 59-142 277-371 385-476 490-586 228-635 16-128 157-272 585-701 60-156 157-264 266-372 374-477 478-587 589-700 44-51 735-750 947-971 727-749 1wuzA(1-103) 3e-50 92.23% 3q2wA(60-451) 5e-22 25.75% 3q2wA(21-220) 3e-05 23.08% 2ystA(8-119) 5e-05 28.07% 3q2wA(17-538) 9e-83 20.99% 1wuzA(1-103) 1e-26 92.23% PF08266(2-83) 1e-23 63.41% PF00028(1-91) 1e-10 41.76% PF00028(2-91) 2e-07 35.79% PF00028(3-92) 2e-06 37.63% PF08266 9e-47 166.0% PF00028 7.3e-19 73.3% PF00028 3e-13 54.6% PF00028 8.7e-15 59.7% 1dnvA(14-391) 4e-63 7.73% 1f5aA1(11-116) 4e-22 8.85% 1l3wA5(1-106) 1e-13 13.33% 1op4A(3-102) 1e-08 12.82% b.1.6 5.8e-11 41.0% b.1.6 1.4e-21 75.5% b.1.6 2.3e-28 98.9% b.1.6 4.1e-27 94.6% b.1.6 2e-26 94.0% b.1.6 3.4e-18 63.9%

Sequence

MRLGNRPEDIRTCVHLRWHIHGLLRQENASVVISKCLRHGAWRLLLWLLLLATWDVGSGQ
LHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRVVSKDRGDLLEVNLQNGILFVNSRI
DREELCGQNAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPIFSVAEQKILVAESRLLDS
RFPLEGASDADVGENSMLTYKLSSNEFFILDIVNKRGKGKFPVLVLRKLIDREENPQLKL
LLTATDGGKPEFTGSVSLLIQVLDVNDNAPVFDRSVYEVKMYENQENKTLVIWLNATDSD
EGINKEVEYSFSSLASSIIRQKFLINEKTGEIKINGAIDFEESNNYEIHVDATDKGYPPM
VAHCTVLVEILDENDNAPEIVLTSLSLPVKEDAPLGSVIALISVSDKDSGVNGQVTCSLT
NHVPFKLVSTFKNYYSLVLDSALDRETTADYKVVVTARDGGSPSLWATASVSVEVADVND
NAPAFAHPEYTVFVKENNPPGVHIFTVLAVDADAQENALVSYSLVERRVGERLLSSYVSV
HAESGKVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVQDENDNPPTLLGHQS
GGPAGEFSQLVSRSVGAGHVVSKVRAVDADSGYNAWLSYELHPTVGARSPFRVGLYTGEI
SMTRALDESDLPRQRLLVLVKDHGEPMLIATATVLVSLVENGQVPKASSQGLPNSSRREA
SLMDVNVYLIIAICAVSSLLVLTLLLYTALRCSAVPMQAGCGLGKPTLVCSSAVGTWSYS
QQRQQRVCSGEGPPKTDLMAFSPSLTPCPVAEVGMESHSVGGDVPGKPRQPNPDWRYSAS
LRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKY
GPGNPKQSGPGELPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEETKKKKKKKKG
NKTQEKKEKGNSTTDNSDQ

Region:1-979
Length:979aa
Label:Full sequence
Reset:click