Input sequence

Protein name Cadherin-related family member 1
Organism Rattus norvegicus Length 859
Disorder content 5.1% ProS content 3.0%
IDEAL NA UniProt Q91XU7

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 859 1-5 6-761 762-765 766-795 796-834 835-859 6-761 766-795 835-859 1-5 796-834 1-5 796-797 809-822 830-834 233-677 23-215 122-342 140-677 20-239 482-553 144-237 40-127 140-238 252-345 478-568 181-627 43-315 592-679 38-128 129-239 235-395 349-465 461-606 571-679 94-112 734-745 789-799 817-832 7-24 703-725 3q2wA(94-540) 1e-26 27.05% 2wcpA(9-187) 3e-22 39.38% 2a62A(93-318) 7e-17 28.76% 3q2wA(5-540) 1e-65 21.69% 4apxB(2-237) 8e-22 23.55% PF00028(5-75) 1e-05 47.95% PF00028(5-91) 0.0006 35.79% PF00028 2.2e-07 35.1% PF00028 2.6e-18 71.4% PF00028 3.6e-13 54.4% PF00028 2.5e-19 74.8% 1dnvA(5-412) 1e-39 8.83% 2nlzA1(266-527) 6e-25 11.46% 1edhA1(17-98) 1e-07 18.48% b.1.6 8.9e-13 44.5% b.1.6 5.1e-26 90.8% b.1.6 8.3e-25 85.8% b.1.6 2.6e-10 38.2% b.1.6 4.1e-29 100.6% b.1.6 3.6e-16 57.0%

Sequence

MRRGPQVALVLGLLCIYLAQANFAPHFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGT
DPEGDPISYHISFDPSTRSVFSVDPNFGNITLVEELDREREDEIEAIISISDGLNLVAEK
VVIVVTDANDEAPRFLQEPYNILVPENTPAGSSIFKVQAEDKDTGSGGSVTYFLQSLHSS
KFTVDRHSGVLRLQAGATLDYEKSRAHFITVVAKDGGGRLRGADVVFSATTTVTINVEDV
QDTAPIFVGTPYYGYVYEDTLPGSEVLTVVAIDGDRGKPNHILYRLLNESDGLFEINETS
GAISVLQSPAQLRREVYELHVQVTEVNSSGSPAAQSTVPVIIRIVDLNNHPPTFYGESGP
QNKFELSMFEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIIVENSAAIDFEKSKSLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIA
RIPENVPGGSNVVAVTAVDPDTGPWGKVQYSIYGTGSDLFLIHPSTGLIYTQPWASLDAE
GTSRYNFYVKAEDMDGRYSLAEVFVTLLDVNDHYPQFVQSVQEKTMVLGTPLKIEATDQD
AEEPNNLVDYSITRAEPVNVFDIDAHTGEIRLKNSIRSLEALHNITPSGEYSWSLQVQAK
DRGSPSFSTTALLKIDITDTERLSRSSMAAFLIQTKDNPMKAVGVLAGVMAIVVAITVLI
STATFWRNKKSNKVLPVRRVLRRRPSPAPHTVRIEWLKFRRAKAASKFILKEDPPNENCN
NSRVGVTVPPRAPALPPPPKMASSTVAQQTVPTVSGSLTPQPSQQLPTPKPLGGPAQSSL
VSELKQKFEKKSLGNKAYV

Region:1-859
Length:859aa
Label:Full sequence
Reset:click