Input sequence

Protein name Protocadherin 18
Organism Mus musculus Length 1134
Disorder content 35.1% ProS content 23.0%
IDEAL NA UniProt Q8VHR0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1134 1-20 21-58 59-62 63-359 360-365 366-684 685-697 698-744 745-754 755-761 762-939 940-947 948-1134 21-58 63-359 366-684 698-744 755-761 940-947 1-20 685-697 762-939 948-1134 1-20 695-697 762-771 787-794 800-818 843-851 860-892 913-934 948-954 979-1014 1022-1027 1033-1066 1081-1134 197-676 30-133 141-676 34-238 28-111 474-567 252-345 588-666 371-455 142-236 28-114 142-237 251-345 365-456 470-567 586-677 202-635 78-315 600-676 32-130 131-238 234-394 347-457 458-568 570-678 12-21 772-783 988-1009 698-720 3q2wA(59-540) 1e-25 26.76% 1wuzA(5-103) 5e-12 38.46% 3q2wA(4-540) 8e-72 24.17% 2wcpA(20-206) 2e-25 25.6% PF08266(1-81) 3e-11 38.1% PF00028(5-92) 3e-10 43.62% PF00028(2-92) 4e-09 36.17% PF00028(3-81) 8e-08 36.71% PF00028(7-91) 2e-05 38.82% PF00028(1-91) 0.0001 32.65% PF08266 5.6e-09 34.1% PF00028 1.1e-14 59.4% PF00028 7.3e-23 86.6% PF00028 3.3e-13 54.5% PF00028 8.9e-19 73.0% PF00028 1.6e-07 35.6% 1dnvA(14-412) 7e-62 6.8% 2nlzA1(313-527) 1e-24 10.2% 1p32A(5-78) 6e-05 8.86% b.1.6 3.6e-06 23.9% b.1.6 8.7e-27 93.5% b.1.6 8.8e-33 113.2% b.1.6 3.7e-22 79.1% b.1.6 2e-28 100.9% b.1.6 2.1e-18 64.6%

Sequence

MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQL
FHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
YFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKID
SEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLMS
PGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFHV
TRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSAEWALSVIIQD
KGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGF
SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQQ
HSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASLD
TFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSVQP
SSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS

Region:1-1134
Length:1134aa
Label:Full sequence
Reset:click