Input sequence

Protein name Chloride channel protein CLC-f
Organism Arabidopsis thaliana Length 781
Disorder content 20.2% ProS content 12.4%
IDEAL NA UniProt Q8RXR2

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 781 1-116 117-225 226-231 232-437 438-446 447-491 492-496 497-567 568-572 573-586 587-598 599-674 675-682 683-766 767-781 117-225 232-437 447-491 497-567 573-586 599-674 683-766 1-116 226-231 438-446 587-598 767-781 7-18 32-35 46-83 109-116 226-231 438-446 587-598 774-781 610-730 230-544 186-552 619-749 123-547 614-763 108-551 613-676 678-763 20-36 58-71 85-93 274-291 397-408 438-452 470-482 738-748 180-202 277-299 314-336 356-378 388-410 455-477 502-524 531-550 3kpbA(1-99) 3e-15 23.97% PF00654(45-345) 8e-26 35.85% PF00654 7.9e-22 83.1% PF00571 1.2e-22 85.8% 1kpkA(18-424) 2e-51 22.1% 1pvmA4(2-140) 5e-15 19.87% f.20.1 1.2e-75 262.3% d.37.1 4.1e-13 48.0% d.37.1 8.5e-05 18.4%

Sequence

MSSGGAGEYNEDRHLLRSTDGDEVGIGGGEGDLDVESQSPAIRSGAGGVRDLFKHIDRRF
SLSGRRLSFKRMENIRVDRERHNPSSSSAFSAAGEEDGGGISNLHSVDDRNDEYGFDEEV
LGDSAPPEWALLLIGCLIGVAAGICVAGFNKGVHVIHEWAWAGTPNEGAAWLRLQRLADT
WHRILLIPVTGGVIVGMMHGLLEILDQIRQSNSSQRQGLDFLAGIYPVIKAIQAAVTLGT
GCSLGPEGPSVDIGKSCANGFALMMENNRERRIALTAAGAASGIASGFNAAVAGCFFAIE
TVLRPLRAENSPPFTTAMIILASVISSTVSNALLGTQSAFTVPSYDLKSAAELPLYLILG
MLCGAVSVVFSRLVTWFTKSFDFIKDKFGLPAIVCPALGGLGAGIIALKYPGILYWGFTN
VEEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGS
AAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVLLLFELTKDYRILLPLMGA
VGLAIWVPSVANQGKESDSSEGRSTGRGYSSLSPSERKTEGVWRHTDNADSLELTVIENP
DHNSFLDEETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAG
ILTHGDIRRYLSNNASTILDENTCPVSSVCTKKISYRGQERGLLTCYPDATVGVAKELME
ARGVKQLPVVKRGEVIHKGKRRKLLGLLHYDSIWTFLRDEMSRRRSINDRRKDKEVGTNG
H

Region:1-781
Length:781aa
Label:Full sequence
Reset:click