Input sequence

Protein name CLIP-associated protein
Organism Arabidopsis thaliana Length 1439
Disorder content 38.4% ProS content 13.5%
IDEAL NA UniProt Q8RWY6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1439 1-212 213-269 270-503 504-797 798-949 950-956 957-1016 1017-1205 1206-1427 1428-1439 1-212 270-503 798-949 957-1016 1206-1427 213-269 504-797 1017-1205 1428-1439 213-219 269-269 504-504 579-584 678-683 714-734 745-797 1017-1017 1042-1047 1066-1080 1088-1096 1106-1112 1123-1129 1143-1191 1435-1439 275-500 83-205 845-989 271-500 7-221 786-1019 1260-1435 294-488 805-990 11-187 77-113 154-190 832-867 1-519 837-1408 2-894 798-1411 57-73 353-362 548-566 632-649 701-713 1217-1229 4k92A(17-239) 9e-19 28.19% 4g3aA(83-205) 7e-16 35.48% 4g3aA(50-189) 1e-09 24.66% 4k92A(13-239) 3e-37 25.97% 4g3aA(9-220) 1e-17 26.85% 4qmhA(7-233) 6e-09 16.6% 4y5jA(54-224) 0.0001 12.43% PF12348(5-199) 3e-12 30.3% PF12348(10-192) 3e-12 28.34% PF12348(9-189) 9e-08 31.55% PF02985 0.00056 23.8% PF02985 0.00017 25.5% PF02985 0.00062 23.7% 1u6gC(5-528) 1e-15 14.47% 1u6gC(4-629) 1e-13 9.49% a.118.1 3.1e-39 135.1% a.118.1 7.8e-47 160.6%

Sequence

MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPAEVTSLVDSCLDLLKDSNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYAWMHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGSQFREELQRHHLPSYMVKDINARLERIEPQLRSTDGRSAHHVVNEVKAS
SVNPKKSSPRAKAPTRENSLFGGDADITEKPIEPIKVYSEKELIREFEKIAATLVPEKDW
SMRISAMRRVEGLVAGGATDYSCFRGLLKQLVGPLSTQLADRRSTIVKQACHLLCLLSKE
LLGDFEACAETFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAESAKHDRN
AILRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRMFAKT
WPDRSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRERHSQPSFSQTSAPSNLPGYGTS
AIVAMDRSSNLSSGGSLSSGLLLSQSKDVNKGSERSLESVLQSSKQKVSAIESMLRGLHI
SDRQNPAALRSSSLDLGVDPPSSRDPPFHAVAPASNSHTSSAAAESTHSINKGSNRNGGL
GLSDIITQIQASKDSGRSSYRGNLLSESHPTFSSLTAKRGSERNERSSLEESNDAREVRR
FMAGHFDRQQMDTAYRDLTFRESNASHVPNFQRPLLRKNVGGRMSAGRRRSFDDSQLQIG
DISNFVDGPASLNEALNDGLNSSSDWCARVAAFNFLQTLLQQGPKGAQEVIQSFEKVMKL
FLRHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSST
LEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLW
LAKLTPLTRDKNTKLKEASITCIISVYNHYDSAGLLNYILSLSVEEQNSLRRALKQYTPR
IEVDLLNYMQSKKEKQRIKSYDPSDAIGTSSEEGYAGASKKNIFLGRYSGGSIDSDSGRK
WSSSQEPTMITGGVGQNVSSGTQEKLYQNVRTGISSASDLLNPKDSDYTFASAGQNSISR
TSPNGSSENIEILDDLSPPHLEKNGLNLTSVDSLEGRHENEVSRELDLGHYMLTSIKVNT
TPESGPSIPQILHMINGSDGSPSSSKKSGLQQLIEASVANEESVWTKYFNQILTVVLEVL
DDEDFSIKELALSLISEMLKSQKDAMEDSVEIVIEKLLHVSKDTVPKVSTEAEQCLTTVL
SQYDPFRCLSVIVPLLVTEDEKTLVACINCLTKLVGRLSQEELMDQLSSFLPAVFEAFGS
QSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQVRLVTIYANRISQARNGAPIDADT

Region:1-1439
Length:1439aa
Label:Full sequence
Reset:click