Input sequence

Protein name Protocadherin Fat 3
Organism Rattus norvegicus Length 4555
Disorder content 8.3% ProS content 6.9%
IDEAL NA UniProt Q8R508

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 4555 1-694 695-708 709-910 911-914 915-2641 2642-2645 2646-4174 4175-4346 4347-4350 4351-4555 1-694 709-910 915-2641 2646-4174 4347-4350 4175-4346 4351-4555 4175-4181 4187-4211 4225-4287 4294-4331 4338-4346 4351-4375 4389-4434 4445-4481 4488-4499 4505-4555 3057-3532 729-1152 1462-1960 2734-3160 2336-2686 1823-2165 419-829 1076-1295 2069-2382 178-554 116-235 4028-4132 1347-1541 3838-4001 3033-3540 729-1241 1458-1959 2734-3213 1050-1555 2195-2697 379-923 132-567 1901-2383 2514-2915 3449-3637 41-149 4022-4132 3836-3999 3242-3328 1050-1137 1573-1660 3349-3435 1156-1244 732-820 3034-3115 3136-3208 2091-2178 2294-2383 1271-1346 480-554 2824-2913 941-1017 2504-2589 1776-1870 2402-2486 1466-1555 1679-1759 846-907 163-255 2931-3006 3451-3541 2607-2698 3865-3995 162-256 476-568 582-671 730-821 835-926 940-1031 1047-1138 1152-1244 1258-1349 1366-1450 1464-1556 1570-1661 1675-1759 1773-1871 1882-1972 1986-2074 2088-2178 2190-2277 2291-2384 2398-2486 2500-2590 2604-2698 2818-2914 2928-3019 3033-3121 3135-3226 3240-3331 3345-3436 3450-3541 3864-3993 4024-4056 4063-4094 4101-4132 3075-3484 875-1309 2129-2547 1507-1919 1302-1689 1823-2233 115-512 2811-3198 717-1002 456-791 2549-2884 3456-3611 3819-4004 4027-4133 2497-2598 3783-3826 710-4035 4016-4067 4060-4097 4096-4137 688-701 834-844 1018-1035 1987-1998 2272-2285 2789-2809 3214-3226 4094-4107 4159-4174 4155-4174 1l3wA(24-523) 3e-35 28.63% 1l3wA(6-445) 3e-30 28.67% 1l3wA(5-517) 1e-26 28.17% 3q2wA(31-476) 9e-31 28.22% 3q2vA(51-420) 4e-25 28.35% 3q2vA(51-419) 5e-24 27.78% 3q2vA(51-440) 1e-18 26.83% 2a62A(34-255) 3e-24 37.0% 3ubhA(90-406) 7e-23 32.42% 3ubhA(8-395) 4e-15 22.41% 2wcpA(71-188) 5e-12 34.17% 4xbmB(263-368) 1e-16 40.57% 4nupA(1-198) 1e-07 25.96% 3qcwA(5-166) 5e-07 25.0% 1l3wA(7-529) 2e-77 26.07% 1l3wA(6-529) 9e-66 24.54% 1l3wA(1-516) 3e-60 24.95% 1l3wA(31-521) 3e-55 26.35% 3q2wA(8-540) 5e-58 22.34% 3q2wA(12-540) 6e-54 23.69% 3q2wA(4-538) 1e-48 21.31% 3q2wA(83-540) 2e-43 20.85% 3q2wA(18-540) 9e-42 19.66% 3ubhA(6-409) 5e-41 24.82% 2a4eA(6-207) 6e-11 17.56% 3qrbA(107-213) 0.001 26.5% 4cudA(3-114) 5e-31 36.28% 3v64A(4-177) 3e-16 26.82% PF00028(3-89) 7e-13 49.43% PF00028(4-91) 9e-13 54.55% PF00028(4-91) 3e-12 45.45% PF00028(5-91) 2e-11 40.23% PF00028(5-92) 5e-11 48.31% PF00028(3-91) 2e-10 43.82% PF00028(2-84) 2e-09 43.37% PF00028(2-75) 6e-08 47.3% PF00028(4-92) 2e-07 35.56% PF00028(4-91) 2e-07 42.22% PF00028(12-89) 5e-07 41.77% PF00028(5-79) 7e-07 50.0% PF00028(7-91) 3e-06 44.44% PF00028(2-79) 5e-06 43.59% PF00028(5-89) 8e-06 42.53% PF00028(4-91) 1e-05 32.63% PF00028(5-92) 2e-05 39.77% PF00028(3-91) 7e-05 35.87% PF00028(5-92) 9e-05 37.5% PF00028(12-75) 9e-05 42.19% PF00028(2-91) 0.0001 35.79% PF00028(4-76) 0.0002 39.47% PF00028(2-92) 0.0006 35.87% PF00028(4-92) 0.0006 34.78% PF00054(2-131) 2e-08 30.15% PF00028 5.8e-19 73.6% PF00028 5.8e-22 83.6% PF00028 0.00053 23.9% PF00028 1.1e-17 69.4% PF00028 7.8e-24 89.8% PF00028 6e-23 86.8% PF00028 3.9e-24 90.8% PF00028 1.7e-25 95.3% PF00028 2.8e-14 58.0% PF00028 1.7e-06 32.2% PF00028 9.1e-21 79.6% PF00028 4.2e-19 74.1% PF00028 1.6e-19 75.5% PF00028 2.3e-19 74.9% PF00028 4.6e-07 34.1% PF00028 1.6e-12 52.2% PF00028 5.6e-12 50.4% PF00028 2.4e-20 78.2% PF00028 2e-19 75.2% PF00028 2.5e-10 44.9% PF00028 6.4e-22 83.4% PF00028 3.6e-09 41.1% PF00028 3.5e-18 71.0% PF00028 4.7e-11 47.3% PF00028 2.9e-21 81.3% PF00028 4.3e-24 90.6% PF00028 9.4e-28 102.8% PF00028 6.8e-27 99.9% PF00028 1.1e-06 32.8% PF02210 6.4e-31 113.3% PF00008 1.6e-05 28.9% PF00008 3.4e-07 34.5% PF00008 1.7e-07 35.5% 1dnvA(6-397) 3e-52 9.05% 1dnvA(5-412) 2e-48 4.74% 1dnvA(6-410) 9e-41 8.47% 1dnvA(5-395) 2e-40 6.78% 1dnvA(5-381) 8e-35 7.52% 1dnvA(6-409) 1e-34 7.33% 1dnvA(15-399) 5e-33 6.81% 2nlzA1(142-530) 3e-44 9.09% 2nlzA1(251-529) 3e-34 8.78% 2nlzA1(243-527) 1e-30 7.54% 2nlzA1(208-528) 2e-28 8.43% 1f15A(1-156) 9e-18 11.18% 1dykA1(2-182) 4e-24 18.52% 1lk9A(19-127) 1e-16 12.84% 1ehxA(2-94) 5e-11 7.84% 1e0fI(7-42) 0.0008 22.73% b.29.1 2.7e-55 135.2% g.3.11 1.7e-09 37.1% g.3.11 6.3e-09 30.7% g.3.11 9.8e-11 38.3%

Sequence

MGVTMRHCIDTRPPSCLIFLLLKLCATVSQGLPGTGPLGFHFTHALYNATVYENSAARTY
VNSQSRMGITLIDLSWDIKYRIVSGDEEGFFKAEEVIIADFCFLRIRTKGGNSAILNREI
QDNYLLIIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVT
ATDADIGSNGEFYYYFKNKVDLFSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMKLY
GNNGVSSTAKLYVHIERINEHAPIIHVVTHTPFSLDKEPTYAVVTVDDLDEGANGEIESV
SIVDGDPLEQFFLAKEGKWMNEYKVKERRQVDWESFSYGYNLTIQAKDKGSPQKFSELKT
VHIANPRRDSTPIKFEKDVYDISISEFSPPGVMVAIVKVNPEPLDVEYKLLPGKDAEYFK
INPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTIGIEDANDHTPEFQETLYETFV
NESVPVGTNVLTVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPE
TYRFIVRASDWGSPYRHESEVNVTIRVGNVNDNSPLFEKVACQGVISYDFPVGGHITAIS
AIDIDELELVKYKIISGNELGFFYLNPDSGVLQLKKSLMNSGIKNGNFALRITATDGENF
ADPMAINISVLHGKVSSKSFSCRETRVAQKLAEKLLIKAKANGKLNQEDGFLDFYSINRQ
GPHFDKSFPSDVAVKENMPVGTNILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETG
QLKVLMPMDREHTDLYVLNITIYDLGKPQKSSWRLLTVNVEDANDNSPVFLQDSYSVSIL
ESSSIGTEIIQVEARDKDLGSNGEVTYSVLTDTHQFVINSSTGIVYIADQLDRESKANYS
LKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQ
DPDLGLGGQVRYSLVNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVSL
SSISFVEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDEDSGRDGEIQYS
IRDGSGLGRFNIDDESGVITAADILDRETTASYWLTVYATDRGVVPLYSTIEVYIEVEDV
NDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIK
TGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQI
KLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTGMVSSRKQFTA
GSYDILTIKAVDNGRPQKSSTARLHIEWIKKPPPSPIPLTFDEPFYNFTIMESDKVTEIV
GVVSVQPANTPLWFDIIGGNFDSSFDAEKGVGTIVIAKPLDAEQRSVYNMSVEVTDGTNV
AVTQVFITVLDNNDNGPEFSQPHYDVTISEDVPPDTEILQIEATDRDEKHKLSYTIHSSI
DAISMRKFRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDAND
HSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLG
IITISKEPDMTAMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSHPKFTHKDYQAEVN
ENVDIGTSVILISAISQSTLIYEVKDGNINGVFTINPYSGVITTRRALDYEHTSSYQLII
QATNMAGMASNATVSVQVVDENDNPPVFLFSQYSGSLSEAAPINSLVRSLDNSPLVIRAT
DADSNQNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHEVIAHFHFHVHVRDSGNPQL
TAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEVLKVSATDPDSEVPPELTYS
LMEGSVDHFLMDPNTGVLTIKNNNLSKDHYMLIVRVSDGKFYSTAMVTIMVKEAMDSGLH
FTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNPGNKFKIKSTSGVIQTTGVP
FDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGT
LIYRVTAIDKDKGANGEVTYVLQDDYGHFEINPNSGNVILKEAFNSDLSNIDYGVTILAK
DGGTPSLSTFVELPITIVNKAMPVFDKPFYTASINEDISINTPILSINATSPEGQGIIYL
IIDGDPFQQFNIDFDTGVLKVISPLDYEVMSVYKLTVRASDALTGARAEVTVDLLVDDVN
DNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDS
SSGLILTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYES
YVSELAPRGHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVLTLSSHRKQRM
EPLYSLNVSVSDGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENAASGTKVIHVRAT
DGDPGTYGQVSYSIINDFAKDRFLIDSNGQIITTERLDRENPLEGDISIYLRALDGGGRT
TFCTVRVIVVDENDNAPQFMTLEYRASVRADVGRGHLVTQVQALDPDDGANSRITYSLYS
EASVSVADLLEIDPDNGWMVTKGNFNQLRNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPP
ETFLPSFTQSQYSFTIAEDTSIGSTIDTLRILPNQSVRFSTVNGERPENNKENVFIIEQE
TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYET
IIMEGMPVGTKLAQVRAIDTDWGANGQVTYSLHSDSHLEKVMEAFNIDSNTGWISTLKDL
DHETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGE
VVAVLSTLDKDTSNINRQVSYHITGGNPRGRFALGMVQSEWKVYVKRPLDREEQDIYFLN
ITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDADIGSN
GDIRYSLYGSGNSDFFLDPESGELKTLALLDRERVPVYNLIARATDGGGRFCSSTVLLLL
EDVNDNPPVFSSNHYTACVYENTATKALLTRVQAVDPDVGINRKVVYSLEDSASGVFSID
SSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDY
LVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFRINPKTGGISVLEALDY
EMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEGDSVI
LLIAEDVDSKPNGQIRFSIVGGDRDNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDS
GIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPP
FSFSILSGNEDEEFMLDSHGILRSAVVFRHMESPEYLLCIQAKDSGKPQQVSHTYIRVRV
IEESTHKPTAIPLEIFIVTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVNSH
DGKIIALGGLDSGKYVLNVSVSDGRFQVPIDVVVHVEQLVHEMLQNTVTIRFENVSPEDF
VGLHMHGFRRILRNAVLTQKQDSLRIISIQPVVGTNQLDMLFAVEMHSSEFYKPAYLIQK
LSNARRHLENVMHIAAILEKNCSGLDCQEQHCEQGLSLDSHALMTYSTARISFVCPRFYR
NVRCTCNGGVCPGSNDPCVEKPCPEDMQCVGYEASRRPFLCQCPPGKLGECSGHTSLSFA
GNSYIKYRLSENSREEDFKLALRLRTLQSNGIIMYTRANPCMILKIVEGKLWFQLDCGSG
PGILGISSRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTDSAIFFGAL
VQADNIRSLTDTRVTQVLGGFQGCLDSVVLNHNELPLQNKRSSFAEVVGLTELKLGCVLY
PDACQRSPCLHGGSCSGLPSGGYQCSCLSQFTGTNCESEITACFPNPCRNGGSCDPIGNT
FICSCKAGLTGVTCEDDVDECEREECENGGSCVNLFGSFFCNCTPGYVGQYCGLRPVVVP
NIQAGHSYVGKEELIGIAVVLFVIFTLIVLFIVFRKKVFRKNYSRNNITLVQDPATAALL
HKSNGIPFRSLRAGDGRNVYQEVGPPQVPVRPMAYTPCFQSDSRSNLDKGLDALGGEPQE
LSTFHPESPRILTARRGVVVCSVAPNLPAVSPCRSDCDSIRKNGWDTGSENKGAEDTGEV
TCFANSNKGSNSEVQSLNSFQSDSGDDNAYHWDTSDWMPGARLSDIEEMPNYESQDGGAV
HQGSTRELESDYYLGGYDIDSEYPPPHEEEFLSQDQLPPPLPEDFPEQYEALPPSQPTSL
TGTMSPDCRRRPRFHPSQYLPPHPLPGETDLGGPPSSCDFSTFAVSMNQGTEVMAPTDSV
SLSLHNSRGTSSSDMSARCGFDDSEVAMSDYESAGELSLTNLHIPFVETQHQTQV

Region:1-4555
Length:4555aa
Label:Full sequence
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