Input sequence

Protein name Probable signal recognition particle 43 kDa protein, chloroplastic
Organism Oryza sativa subsp.japonica Length 388
Disorder content 12.1% ProS content 7.5%
IDEAL NA UniProt Q8LSQ2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 388 1-29 30-370 371-388 30-370 1-29 371-388 1-18 371-376 384-388 69-319 321-371 69-319 321-371 159-191 194-226 321-370 156-232 319-371 267-320 65-125 92-235 268-317 319-380 131-138 251-266 373-388 3ui2A(1-234) 1e-63 54.98% 1x3pA(1-50) 2e-08 50.98% 3ui2A(1-234) 2e-64 54.98% 1x3pA(1-50) 6e-11 50.98% PF00023 0.00033 24.6% PF00023 6.9e-07 33.5% PF00385 1.1e-11 49.4% 1iknD(136-212) 4e-16 27.85% 1x3qA1(4-53) 8e-10 28.3% 1x3qA1(2-55) 7e-06 57.41% 1x3qA1(3-50) 0.0002 36.07% d.211.1 4.3e-25 80.3% b.34.13 0.0003 14.4% b.34.13 1.8e-09 33.7%

Sequence

MEAVLRHPSLSRLKPPNPNAQRTPALSITVPFRLRLPNRRLTAAAVFQDQTNPRNPASKG
GDDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAADV
VAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRALA
EAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLELVQDVLA
KTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDREW
VRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENVD
AELLQEFEQRQSGVAAGGDAPPPPPVAG

Region:1-388
Length:388aa
Label:Full sequence
Reset:click