Input sequence

Protein name Endoribonuclease Dicer homolog 1
Organism Oryza sativa subsp.japonica Length 1883
Disorder content 16.5% ProS content 12.4%
IDEAL NA UniProt Q8LMR2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1883 1-13 14-39 40-50 51-78 79-263 264-485 486-497 498-582 583-615 616-785 786-797 798-1268 1269-1276 1277-1433 1434-1465 1466-1878 1879-1883 14-39 51-78 264-485 498-582 616-785 798-1268 1277-1433 1466-1878 1-13 40-50 79-263 486-497 583-615 786-797 1269-1276 1434-1465 1879-1883 4-11 40-40 95-104 110-128 136-233 486-497 583-615 786-797 1269-1276 1434-1465 1803-1872 1538-1704 268-761 812-905 1198-1315 1328-1435 1188-1689 268-765 812-918 1803-1872 1710-1773 1573-1686 1353-1498 817-904 1171-1315 670-741 268-401 664-744 817-912 1158-1319 1353-1498 1573-1686 1713-1773 1798-1870 1537-1704 1323-1409 621-786 1802-1872 1185-1296 1699-1773 279-395 279-785 1162-1299 1311-1525 1534-1712 1706-1789 1791-1870 2-18 75-97 104-129 144-148 171-197 1774-1785 2lrsA(1-70) 2e-32 88.57% 2eb1A(7-163) 5e-30 41.67% 4gl2A(4-477) 5e-27 25.82% 2kouA(1-91) 4e-12 35.11% 4ngdA(168-278) 4e-11 35.54% 3rv1A(92-200) 1e-05 34.82% 2fflA(154-715) 4e-61 18.91% 4gl2A(4-479) 1e-38 23.62% 2kouA(1-102) 1e-24 33.64% 2lrsA(1-70) 1e-23 88.57% 1x49A(13-81) 7e-05 21.74% PF00636(1-93) 4e-13 41.23% PF00636(1-93) 2e-07 30.14% PF03368(1-84) 1e-12 36.36% PF02170(7-120) 1e-07 29.45% PF00271(6-72) 2e-07 44.44% PF00270 2.4e-07 14.1% PF00271 2.8e-15 61.4% PF03368 9.3e-49 172.6% PF02170 2.4e-42 151.3% PF00636 1.9e-36 131.7% PF00636 5.6e-42 150.1% PF00035 1.9e-09 42.0% PF00035 1.5e-10 45.6% 1o0wA1(10-159) 2e-29 24.57% 1i4sA(6-93) 1e-12 29.55% 1z3iX1(98-249) 3e-10 12.65% 1ekzA(13-75) 3e-09 25.35% 1r4kA(41-127) 2e-08 19.13% 1qu6A2(2-80) 3e-07 12.66% 1yksA1(6-139) 5e-05 15.33% c.37.1 1.4e-25 85.1% b.34.14 1e-19 69.6% a.149.1 6.1e-36 119.3% a.149.1 8.2e-41 136.1% d.50.1 7.5e-12 39.0% d.50.1 8.5e-13 42.1%

Sequence

MAGGGGVGGGAGEHAAAAYWYDACEDGASLLCGIDFAASADFDPGLIPAMDTGADDGFVA
EIDRILESINAESSPAPPPPPPPPLPEPVPVAPPELPIQEKQLQVASAPVANNAVAVVGV
VQRSKGVVARKEPRRESHGCAANGGGGGEWRDGKRPRLASGGVGGPRQEWRRRPMLPPPP
SRGWDDRRGRRDFDRVRKHEHHRREARGFWERDRGGKMVFRSGTWEQESDREAKRARTQD
GGSMEKKAEADRMGAAQREKPVAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLL
IKSVCDKMLKENKKMLAVFLVPKVPLVYQVLVMTAQILLNILRHSIIKMDAIHLLILDEC
HHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDS
VVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMESTVEEAALSSSKRTKWQF
MGARDAGSRDELRLVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTAL
QNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSETSDVEMQNTEKHNTNDLEEGE
LPDSHGEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKV
LAELPSLSFIRCASLIGHNNNQEMRACQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCN
VVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNISHETFLRNARNSEETLRKEAMER
TDLSHLDGTSVLSPVDTSPGSMYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEF
IMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTD
TLLPDRGSGEGEKTEQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIK
LYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASLVFRG
RIEITESQLVLLKSFHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDW
TLVNNIVNTDAWNNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGI
RGAIAEFDIVKASGLVPARDRGHFSDYQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFY
VDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPLIRARGVSYCKNL
LSPRFEHSDAREGDFSENLDKTYYVYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLL
AVQLKDIIDYPVPATKILEALTAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQKHE
GQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIF
DEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVLSSKTLADVVEALIGVYYVAGGKI
AANHLMKWIGIHAELDPEEIPPPKPYDIPESIMRSINFDTLKGVLGIEFQNKGLLVEAIT
HASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVA
VKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFGLGDCKAPKVLGDIVESIAGA
IFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRAGNIAT
VEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEKETATKKEDERDGEKKNGAQMFTRQ
TLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKD
SAAVLLLELLNRDFPDKPDGKQP

Region:1-1883
Length:1883aa
Label:Full sequence
Reset:click