Input sequence

Protein name Probable RNA-dependent RNA polymerase SHL2
Organism Oryza sativa subsp.japonica Length 1218
Disorder content 4.0% ProS content 3.0%
IDEAL NA UniProt Q8LHH9

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:SCOP SEG:LCR 0 1218 1-24 25-916 917-920 921-1130 1131-1136 1137-1164 1165-1170 1171-1201 1202-1205 1206-1209 1210-1218 25-916 921-1130 1137-1164 1171-1201 1206-1209 1-24 1131-1136 1165-1170 1202-1205 1210-1218 1-4 17-24 1131-1136 1165-1170 1202-1205 1210-1218 582-902 450-1160 601-984 598-985 25-144 14-26 80-91 228-243 262-268 2j7nA(261-606) 8e-21 24.51% 2j7nA(128-883) 4e-98 19.58% PF05183(1-373) 2e-100 48.97% PF05183 2.9e-190 642.7% d.58.7 1.3e-05 20.9%

Sequence

MRSPRGGAAAQPSGRRGDTTAAAAGDLVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRC
RVKTSWTPPDSYPDFALPTAPASASAAAAPPRYDRVPPHAFVHFARPEGARRAADLAGET
RLILRGKPLRVASAPDSSLRVSRRSSIAPFRFPDVRLEVGALPSPGAFLAAWRGPDAGLD
LSVDPFDGCCRLVFTRDTAFTFPGFREVAAIRCDVKLEFPVRDVLEVRLYRLDCSLLLRL
AAAPLVHYRTADDDFHEPVPFDLLDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKM
DRALDYMRERRVAIVDCGGGWGPRRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMV
NALVHKGIINQHQLTPEFFSLLGRSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVAR
NPKLLCSKVGDDHAEVRRLVITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGM
QVLNNNVLNSFTAPIVKDLMSNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLR
DKSAWFFAEDRKTTVEAIRKWMGRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFD
DVVHNEYIFSDGIGKITPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTR
LFLRPSMRKFESNHLVLEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLN
NILSDRDVAFEVLTTSCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKAR
IFVPKGRWLMGCLDELGVLEQGQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVI
AKNPCLHPGDVRILEAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEK
LIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEY
GAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLY
RSIQEASNGDVVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRV
RTEAELVTGHITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKN
LLYEMKASAWYQVTYHPKWVEKSRGILGPDGEEIPASLSFAWIPVDYLARIKLRCHGKVR
VEGQKPVERLAAYISERI

Region:1-1218
Length:1218aa
Label:Full sequence
Reset:click