Input sequence

Protein name Probable cyclic nucleotide-gated ion channel 12
Organism Arabidopsis thaliana Length 649
Disorder content 14.6% ProS content 8.3%
IDEAL NA UniProt Q8GWD2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP TMHMM:TMhelix 0 649 1-24 25-578 579-649 25-578 1-24 579-649 10-24 579-582 600-620 636-649 430-543 365-479 230-485 428-550 83-352 365-562 304-358 31-371 360-562 43-62 77-99 130-152 200-222 331-353 1wgpA(8-127) 3e-21 45.9% 2ptmA(6-118) 7e-06 24.35% 16vpA(51-302) 2e-26 5.08% 1wgpA(6-131) 1e-18 43.08% PF00520 0.00089 19.2% 1q3eA(6-192) 2e-20 18.69% 1bl8A(40-94) 2e-06 12.73% f.14.1 1.7e-24 85.0% b.82.3 1.3e-29 103.1%

Sequence

MNHRRSKFARIDSMGVDGKLKSVRGRLKKVYGKMKTLENWRKTVLLACVVALAIDPLFLF
IPLIDSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVH
SKATLKTRLLFHFIVDIISVLPIPQVVVLTLIPLSASLVSERILKWIILSQYVPRIIRMY
PLYKEVTRAFGTVAESKWAGAALNLFLYMLHSYVFGAFWYLSSIERKSKCWRAACARTSD
CNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDALKSGVLEVKPKDF
PRKFVYCFWWGLRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSST
TRVDEMEEKRRDTEKWMSYRVIPEYLKERIRRFEDYKWRETKGTEEEALLRSLPKDLRLE
TKRYLYLDMLKRVPWLNIMDDGWLLEAVCDRVKSVFYLANSFIVREGHPVEEMLIVTRGK
LKSTTGSHEMGVRNNCCDLQDGDICGELLFNGSRLPTSTRTVMTLTEVEGFILLPDDIKF
IASHLNVFQRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKRKLSKTRDNENIPQGTQLN
LASTLYVSRFVSKALQNRRKDTADCSSSPDMSPPVPHKPADLEFAKAEA

Region:1-649
Length:649aa
Label:Full sequence
Reset:click