Input sequence

Protein name Collagen alpha-6(VI) chain
Organism Mus musculus Length 2265
Disorder content 12.8% ProS content 12.8%
IDEAL NA UniProt Q8C6K9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 2265 1-16 17-527 528-532 533-901 902-905 906-1195 1196-1200 1201-1416 1417-1430 1431-1456 1457-1608 1609-1613 1614-1702 1703-1739 1740-1743 1744-2250 2251-2265 17-527 533-901 906-1195 1201-1416 1431-1456 1609-1613 1703-1739 1744-2250 1-16 1417-1430 1457-1608 1614-1702 1740-1743 2251-2265 1-16 1417-1430 1457-1608 1614-1702 1740-1743 2251-2265 808-1177 613-990 227-610 26-200 619-796 807-986 227-410 1963-2143 432-611 996-1176 1748-1938 25-207 1519-1599 1625-1694 1393-1448 621-766 228-378 435-583 808-947 999-1147 1964-2132 1756-1884 1538-1596 26-198 228-406 435-605 621-790 808-981 999-1170 1397-1456 1457-1516 1533-1592 1593-1652 1655-1714 1756-1920 1964-2143 606-796 797-994 990-1176 1948-2174 1747-1947 431-610 224-410 22-203 1509-1694 1393-1597 15-204 221-408 433-613 615-796 801-987 997-1176 1183-1384 1749-1947 1957-2173 138-150 1335-1345 1381-1392 1451-1475 1490-1508 1602-1623 1698-1724 4cn9A(10-389) 7e-29 27.32% 4cn9A(3-391) 2e-28 28.96% 4cn9A(9-387) 1e-21 28.15% 4igiA(3-177) 4e-12 29.38% 1lfaA(2-181) 4e-47 23.63% 1lfaA(3-180) 2e-35 25.0% 1lfaA(3-179) 1e-22 16.93% 1lfaA(3-162) 5e-16 15.85% 1n3yA(1-188) 5e-44 22.34% 1n3yA(1-188) 1e-42 17.55% 1ijbA(7-190) 1e-08 15.9% 4igiA(2-184) 3e-20 27.17% 2pneA(1-79) 3e-12 33.33% 2pneA(2-76) 3e-10 37.33% 2pneA(8-73) 2e-06 37.88% PF00092(1-142) 7e-10 33.78% PF00092(1-148) 8e-09 30.32% PF00092(1-148) 1e-08 31.58% PF00092(1-135) 2e-07 28.37% PF00092(1-147) 2e-06 32.03% PF00092(1-148) 6e-06 30.41% PF00092(1-120) 0.0006 27.13% PF01391(5-63) 3e-05 47.46% PF00092 2.8e-35 127.8% PF00092 2.2e-38 138.1% PF00092 3.9e-50 177.2% PF00092 3.2e-58 204.0% PF00092 3.1e-48 170.8% PF00092 1.4e-40 145.4% PF01391 2.3e-11 48.3% PF01391 2.9e-10 44.7% PF01391 6.3e-06 29.5% PF01391 8.9e-10 43.1% PF01391 3.6e-09 41.1% PF00092 7.4e-14 56.6% PF00092 2.6e-19 74.7% 1auqA(2-199) 3e-32 18.09% 1auqA(6-206) 4e-24 14.22% 1auqA(8-199) 1e-23 18.97% 1auqA(1-206) 2e-23 14.98% 1auqA(8-207) 1e-11 15.94% 1ao3A(2-187) 7e-32 25.27% 1ao3A(2-186) 9e-24 21.81% 1ao3A(2-184) 2e-14 22.04% 1af0A1(3-221) 1e-18 13.0% 1af0A1(4-222) 8e-16 14.48% c.62.1 1.4e-38 128.1% c.62.1 3.8e-43 143.2% c.62.1 4e-51 167.7% c.62.1 3.5e-53 176.5% c.62.1 4.6e-46 152.9% c.62.1 2.5e-48 158.5% c.62.1 9.1e-15 49.0% c.62.1 3.1e-35 118.9% c.62.1 6.9e-35 117.7%

Sequence

MLLVLCLTMICFHVCVNQDSGPEYADVVFLVDSSDHLGLKSFPLVKTFIHKMISSLPIEA
NKYRVALAQYSDALHNEFQLGTFKNRNPMLNHLKKNFGFIGGSLKIGNALQEAHRTYFSA
PTNGRDKKQFPPILVVLASAESEDDVEEAAKALREDGVKIISVGVQKASEENLKAMATSQ
FHFNLRTARDLSVFAPNMTEIIKDVTQYREGMADDIIVEACQGPSVADVVFLLDMAINGS
QEDLDHLKAFLGESISALDIKENCMRVGLVTYSNETRVISSLSTGNNKTEVLQRIQDLSP
QVGQAYTGAALRKTRKEIFSAQRGSRKNQGVPQIAVLVTHRASEDNVTKAAVNLRREGVT
IFTMGIEGANPDELEKIASHPAEQFTSKLGNFSELATHNQTFLKKLRNQITHTVSVFSER
TETLKSACVDTEEADIYLLIDGSGSTQPTDFHEMKTFLSEVVGMFNIAPHKVRVGAVQYA
DTWDLEFEISKYSNKPDLGKAIENIRQMGGNTNTGAALNFTLKLLQRAKKERGSKVPCHL
VVLTNGMSRDSVLGPAHKLREENIRVHAIGVKEANQTQLREIAGEEKRVYYVHEFDALRN
IRNQVVQEICAEEACRDMKADIMFLVDSSGSIGPENFSKMKMFMKNLVSKSQIGADRVQI
GVVQFSHENKEEFQLNTFMSQSDIANAIDRMTHIGETTLTGSALTFVSQYFSPDKGARPN
VRKFLILITDGEAQDIVRDPAIALRKEGVIIYSVGVFGSNVTQLEEISGKPEMVFYVENF
DILQHIEDDLVLGICSPREECKRIEVLDVVFVIDSSGSIDYQEYNIMKDFMIGLVKKADV
GKNQVRFGALKYADDPEVLFYLDELGTKLEVVSVLQNDHPMGGNTYTAEALAFSDHMFTE
ARGSRLHKGVPQVLIVITDGESHDAEKLNTTAKALRDKGILVLAVGIAGANSWELLAMAG
SSDKYYFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFQKMKG
FLVSVVQDFDVSLNRVRIGVAQFSDSYRSEFLLGTFTGEREISTQIEGIQQIFGYTHIGD
ALRKVKYYFQPDMGSRINAGTPQVLLVLTDGRSQDEVAQAAEELRHKGVDIYSVGIGDVD
DQELVQITGTAEKKLTVHNFDELKKVKKRIVRNICTSGGESNCFVDVVVGFDISSLQRGQ
TLLEGQPWMGSYLQDLLRAISSLNGVSCEVGTETQVSIAFQVTNAMERYPSKFEIYSENI
LSSLQGVTVNGPSRLNANLLSSLWDTFQNKSAARGKVVLLFSDGLDDGIEKLEQKSDELR
KEGLNALITIAVDGAADSSDLADLLYIEFGKGFEYRTQFTIGMRNLGSQLSRQLINVAER
TCCCLLCKCTGGDGAMGDPGSAGKKGPPGFKGSDGYLGEEGIAGERGASGPMGEQGTKGC
FGAKGPKGTRGLSGEEGEVGEDGLDGLDGEQGDHGIPGRRGEKGDEGSQGNPGRRGAAGD
RGAKGLRGDPGTPGRDSSIQGPKGLKGDLGRQGRRGWPGSPGTPGSRRKMVVHGRRGHIG
PQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLG
SQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGYGSIGRKGTKGQEGFPGESGLKGDIGD
PGDPGEAGPKGARGKTVSAGIPGEPGSPGEPGPPGRKGVKGARGLASFSTCDLIQYVRDH
SPGRHGKPECPVHPTELVFVLDQSRDVTEQDFERMKGMMVSLVRDVKVREANCPVGARVA
ILAYNSHTRHLIRFSDAYRKDQLLTAIKALPYERSSDSREIGKAMRFISRNVFKRTLPGA
HVRRIATFFSSGPSADAQTITTAAMEFSALDIVPVVIAFSNVPSVKRAFSIDDTGTFQVI
VVPSGSDEGPALERLQRCTFCYDLCKPDASCDQAKPPPIQSYLDTAFLLDGSRHVGSAEF
EDMRDFLEALLDHFEITSEPETSVTGDRVALLSHAPLDFLPNTQRSPVRTEFNLTSYSSK
RLMKRHVDQAVQQLHGDAFLGHALGWALDNVFLNTPNLRRNKVIFVISAGETSHLDAETL
KKESLRAKCHGYALFVFSLGPDWDDKELEDLASHPVDQHLIQLGRIHKPDHGYSVKFVKS
FINSIRHGINKYPPVNLKAKCNRLGSRDLKPPPRQFRSFVPGPQKANLKDHTAEAAKLFQ
DKKRLSSMLKGGRATISSLSRSTRYAFKQGKEAIKATSKLGKRSA

Region:1-2265
Length:2265aa
Label:Full sequence
Reset:click