Input sequence

Protein name Protocadherin Fat 3
Organism Mus musculus Length 4555
Disorder content 8.5% ProS content 7.3%
IDEAL NA UniProt Q8BNA6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 4555 1-11 12-17 18-19 20-694 695-708 709-910 911-914 915-2641 2642-2645 2646-3965 3966-3972 3973-4174 4175-4392 4393-4397 4398-4555 1-11 20-694 709-910 915-2641 2646-3965 3973-4174 4393-4397 18-19 3966-3972 4175-4392 4398-4555 18-19 3966-3972 4175-4181 4187-4288 4294-4330 4336-4375 4389-4392 4398-4438 4449-4498 4512-4555 3055-3540 759-1152 2739-3218 1379-1767 1823-2165 1581-1971 419-829 1076-1295 2069-2382 2272-2561 178-554 2508-2899 116-235 4028-4132 3860-4061 3033-3540 729-1241 1458-1971 2734-3231 2195-2697 1050-1555 379-923 1901-2383 132-567 2514-2915 3449-3637 41-149 4022-4132 3817-3995 3242-3328 1050-1137 1573-1660 3349-3435 1156-1244 3136-3226 3034-3115 732-820 2091-2178 2294-2383 1271-1346 2824-2913 941-1017 1776-1870 2504-2589 480-554 163-255 1679-1759 2931-3006 846-907 3451-3541 2607-2698 2191-2275 3865-3991 162-256 476-568 582-671 730-821 835-926 940-1031 1047-1138 1152-1244 1258-1349 1366-1450 1464-1556 1570-1661 1675-1759 1773-1871 1882-1972 1986-2074 2088-2178 2190-2277 2291-2384 2398-2486 2500-2590 2604-2698 2818-2914 2928-3019 3033-3121 3135-3226 3240-3331 3345-3436 3450-3541 3864-3993 4024-4056 4063-4094 4101-4132 3074-3484 875-1309 115-512 2099-2560 1368-1844 2811-3097 2476-2777 456-791 736-892 1779-1941 2011-2143 3456-3611 2718-2881 1271-1437 1897-2056 3819-4004 45-155 4027-4133 3783-3826 710-4035 4016-4067 4060-4097 4096-4137 688-701 834-844 1018-1035 1987-1998 2417-2424 2789-2809 4094-4107 4159-4174 4155-4174 3q2wA(26-540) 5e-41 29.14% 1l3wA(33-445) 2e-29 28.57% 3q2vA(35-523) 1e-31 27.15% 3q2vA(21-440) 1e-25 25.65% 3q2vA(51-419) 1e-24 28.04% 3q2vA(15-429) 1e-22 22.51% 3q2vA(51-440) 2e-18 27.06% 2a62A(34-255) 2e-24 37.0% 3ubhA(90-406) 6e-29 31.8% 3ubhA(90-378) 1e-15 26.64% 3ubhA(8-395) 1e-14 23.46% 3ubhA(2-394) 5e-12 26.73% 2wcpA(71-188) 5e-12 34.17% 4xbmB(263-368) 9e-17 40.57% 3qcwA(216-429) 3e-06 22.07% 1l3wA(7-529) 6e-81 25.88% 1l3wA(6-529) 7e-64 24.16% 1l3wA(1-529) 6e-60 24.54% 1l3wA(31-535) 1e-58 26.25% 3q2wA(12-540) 3e-58 23.65% 3q2wA(8-540) 1e-57 22.16% 3q2wA(4-538) 5e-48 21.65% 3q2wA(18-540) 7e-47 19.66% 3q2wA(83-540) 2e-44 20.26% 3ubhA(6-409) 4e-41 24.82% 2a4eA(6-207) 6e-11 17.56% 3qrbA(107-213) 0.0004 26.5% 4cudA(3-114) 1e-31 36.28% 2jd4A(5-179) 3e-16 20.88% PF00028(3-89) 6e-14 51.72% PF00028(4-91) 5e-13 54.55% PF00028(4-91) 3e-12 45.45% PF00028(5-91) 2e-11 40.23% PF00028(5-92) 5e-11 48.31% PF00028(2-92) 2e-10 47.83% PF00028(2-84) 6e-09 45.24% PF00028(3-91) 1e-08 41.57% PF00028(4-92) 2e-07 35.56% PF00028(4-91) 2e-07 42.22% PF00028(12-89) 5e-07 41.77% PF00028(7-91) 3e-06 44.44% PF00028(2-79) 6e-06 42.31% PF00028(4-91) 8e-06 32.63% PF00028(5-89) 8e-06 42.53% PF00028(5-79) 8e-06 48.68% PF00028(2-91) 0.0001 35.79% PF00028(5-92) 0.0001 35.23% PF00028(4-76) 0.0002 39.47% PF00028(12-75) 0.0003 40.62% PF00028(2-92) 0.0006 35.87% PF00028(4-92) 0.0006 34.78% PF00028(2-92) 0.001 36.96% PF00054(2-127) 7e-08 29.55% PF00028 5.8e-19 73.6% PF00028 1.3e-21 82.4% PF00028 0.00053 23.9% PF00028 3.2e-16 64.5% PF00028 6.4e-24 90.1% PF00028 4.8e-23 87.2% PF00028 1.2e-24 92.5% PF00028 1.7e-25 95.3% PF00028 2.2e-14 58.4% PF00028 3.8e-05 27.7% PF00028 4.9e-20 77.2% PF00028 3.6e-20 77.6% PF00028 9.2e-19 72.9% PF00028 2.2e-19 75.0% PF00028 1.2e-06 32.7% PF00028 1.6e-12 52.2% PF00028 9.7e-12 49.6% PF00028 9e-19 73.0% PF00028 9.6e-20 76.2% PF00028 8.7e-12 49.8% PF00028 6.4e-22 83.4% PF00028 3.6e-09 41.1% PF00028 4.2e-15 60.8% PF00028 1.5e-11 49.0% PF00028 3.2e-22 84.4% PF00028 4e-24 90.7% PF00028 5e-29 107.0% PF00028 6.8e-27 99.9% PF00028 1.1e-06 32.8% PF02210 1e-29 109.3% PF00008 3.2e-07 34.6% PF00008 4.7e-07 34.0% PF00008 1.7e-07 35.5% 1dnvA(5-397) 3e-54 9.03% 1dnvA(5-412) 5e-48 4.74% 1dnvA(15-399) 1e-34 6.57% 2nlzA1(68-527) 1e-44 9.39% 2nlzA1(72-530) 2e-40 9.31% 2nlzA1(256-531) 1e-38 10.07% 2nlzA1(239-531) 3e-37 8.57% 2nlzA1(243-527) 4e-31 7.54% 1f15A(1-156) 1e-26 10.56% 1f15A(1-152) 3e-23 9.64% 1f15A(22-154) 1e-19 10.22% 1f15A(1-156) 9e-18 11.18% 1f15A(1-156) 8e-16 13.02% 1p32A(2-178) 3e-16 10.5% 1p32A(1-176) 2e-10 11.11% 1dykA1(2-182) 3e-24 18.52% 1l3wA5(8-104) 0.001 9.91% 1lk9A(19-127) 1e-17 12.84% 1e0fI(7-42) 0.0008 22.73% b.29.1 7.9e-55 134.0% g.3.11 8.7e-10 38.2% g.3.11 6.7e-09 30.6% g.3.11 9.8e-11 38.3%

Sequence

MSVTMGHCMGTKPPSCIILLLLKLFATVSQGLPGTGPLGFHFTHSTYNATVYENSAARTY
VNSQSRMGITLIDLSWDIKYRIVSGDEEGFFKAEEVIIADFCFLRIRTKGGNSAILNREI
QDNYLLIIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVT
ATDADIGSNGEFYYYFKNKVDLFSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMKLY
GNNGVSSTAKLYVHIERINEHAPIIHVVSHTPFSLDKEPTYAVVTVDDLDEGANGEIESL
SIVDGDPLEQFFLAKEGKWLNEYKVKERRQVDWESFSYGYNLTIQAKDKGSPQKFSELKT
VHIANPRRDNTPVRFEKDVYEVSISEFSPPGVLVAIVKVSPEPLDVEYKLLPGKDSDYFK
INPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTIGIEDANDHTPEFQEALYETFV
NESVRVGTNVLTVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPE
TYRFIVRASDWGSPYRHESEVNVTIRVGNVNDNSPLFEKVACQGVISYDFPVGGHITAIS
AIDIDELELVKYKIISGNELGFFYLNPDSGVLQLKKSLMNSGIKNGNFALRITATDGENF
ADPMAINISVLHGKVSSKSFSCRETRVAQKLAEKLLIKAKANGKLNLEDGFLDFYSINRQ
GPHFDKSFPSDVAVKEDMLVGTNILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETG
QLKVLMPMDREHTDLYVLNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSIL
ESSSIGTEIIQVEARDKDLGSNGEVMYSVLTDTHQFIINSSTGIVYIADQLDRESKANYS
LKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQ
DPDLGLGGQVRYSLVNDYNGRFEVDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVSL
SSVSFVEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTAHDEDSGRDGEIQYS
IRDGSGLGRFNIDDESGVITAADSLDRETTASYWLTVYATDRGVVPLYSTIEVYIEVEDV
NDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIK
TGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQI
KLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTGMVSSRKQFTA
GSYDILTIKAVDNGRPQKSSTARLHIEWIKKPPPSPIPLTFDEPFYNFTVMESDKVTEIV
GVVSVQPANTPLWFDIVGGNFDSSFDAEKGVGTIVIAKPLDAEQRSVYNMSVEVTDGTNI
AVTQVFIKVLDNNDNGPEFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSI
DAVSMRKFRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDAND
HSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLG
IITISKEPDMAAMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSHPKFTHKDYQAEVN
ENVDIGTSVILISAISQSTLIYEVKDGNINGVFTINPYSGVITTRRALDYEHTSSYQLII
QATNMAGMASNATISVQIVDENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPLVIRAT
DADSNQNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHEAIAHFHFHVHVRDSGNPQL
TAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYIGVEVLKVSATDPDSEVPPELTYS
LMEGSVDNFLMDPNTGVLTIKNNNLSKDHYMLIVRVSDGKFYSTAMVTVMVKEAMDSGLH
FTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNPGNKFKIKSTSGVIQTTGVP
FDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGT
LIYRVTAIDKDKGANGEVTYVLQDDYGHFEINPNSGNVILREAFNSDLSNIDYGVTILAK
DGGNPSLSTFVELPITIVNKAMPVFDKPFYTASINEDITMNTPILSINATSPEGQGIIYL
IIDGDPFQQFNIDFDTGVLKVISPLDYEVTSVYKLTVRASDALTGARAEVTVDLLVDDIN
DNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDS
SSGLILTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYES
YVSELAPRGHFVTCVQASDADSSDLDRLEYSILSGNDRASFLMDSKSGVLTLSSHRKQRM
EPLYSLNVSVSDGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENAASGTKVIHVRAT
DGDPGTYGQVSYSIINDFAKDRFLIDSNGQIITTERLDRENPLEGDISIYLRALDGGGRT
TFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLVTQVQALDPDDGANSRITYSLYS
EASVSVADLLEIDPDNGWMVTKGNFNQLRNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPP
ETFLPSFTQSQYSFTITEDTSIGSTVDTLRILPNQSVRFSMVNGERPENNKEGVFIIEQE
TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYET
IIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTGWISTLKDL
DHETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGE
VVAVLSTLDKDTSNINRQVSYHITGGNPRGQFALGMVQSEWKVYVKRPLDREEQDIYFLN
ITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDADIGSN
GDIRYSLYGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATDGGGRFCSSSVLLLL
EDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDPDVGINRKVVYSLEDSASGVFSID
SSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDY
LVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGISVLEALDY
ETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEGDSVI
LLIAEDVDSKPNGQIRFSIVGGDRDNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDS
GIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGPP
FSFSILSGNEDEEFMLDSHGILRSAVVFRHMESPEYLLCIQAKDSGKPQQVSHTYIRVRV
IEESTHKPTAIPLEIFIVTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVNSH
DGKIIALGGLDSGKYVLNVSVSDGRFQVPIDVVVHVEQLVHEMLQNTVTIRFEDVSPEDF
VGLHMHGFRRILRNAVLTQKQDSLRIISIQPVVGTNQLDMLFAVEMHSSEFYKPAYLIQK
LSNARRHLENVMHIAAILEKNCSGLDCQEQHCEQGLSLDSHALMTYSTARISFVCPRFYR
NVRCTCNGGVCPGSNDPCVEKPCPEDMQCVGYEASRRPFLCQCPPGKLGECSGHTSLSFA
GNSYIKYRLSENSKEEDFKLALRLRTLQSNGIIMYTRANPCMILKIVEGKLWFQLDCGSG
PGILGISSRAVNDGSWHSVFLELNRNFTSLALDDSYVERRRAPLYFQTLSTDSAIFFGAL
VQADNVRSLTDTRVTQVLGGFQGCLDSVVLNHYELPLQNKRSSFAEVVGLTELKLGCVLY
PDACQRSPCLHGGSCSSLPSGGYQCSCLSQFTGTNCESEITACFPNPCRNGGSCDPIGNT
FVCSCKAGLTGVTCEDDVDECEREECENGGSCVNLFGSFFCNCTPGYVGQYCGLRPVVVP
NIQAGHSYVGKEELIGIAVVLFVIFTLIVLFIVFRKKVFRKNYSRNNITLVQDPATAALL
HKSNGIPFRSLRAGDGRNVYQEVGPPQVPVRPMAYTPCFQSDSRSNLDKGLDVLGGEPQE
MSTFHPESPRILTARRGVVVCSVAPNLPAVSPCRSDCDSIRKNGWDTGSENKGTEDTGEV
TCFTNSNKGSNSEVQSLSSFQSDSGDDNAYHWDTSDWMPGARLSDIEEMPNYESQDGGAA
HQGSTRELESDYYLGGYDIDSEYPPPHEEEFLSRDQLPPPLPEDFPDQYEALPPSQPTSL
TSTMSPDCRRRPRFHPSQYLPPHPLPGETDLGGPSSSCDFSTFAVNMNQGTEVMAPTDSV
SLSLHNSRGTSSSEMSARCGFDDSEVAMSDYESAGELSLTNLHIPFVETQQQTQV

Region:1-4555
Length:4555aa
Label:Full sequence
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