Input sequence

Protein name Collagen alpha-1(XVI) chain
Organism Mus musculus Length 1580
Disorder content 84.6% ProS content 83.3%
IDEAL NA UniProt Q8BLX7

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1580 1-16 17-236 237-366 367-378 379-388 389-393 394-435 436-442 443-1580 17-236 367-378 389-393 436-442 1-16 237-366 379-388 394-435 443-1580 1-16 237-250 258-366 379-388 394-435 443-988 1002-1580 44-242 44-242 375-434 444-503 584-643 679-738 748-805 809-867 876-936 1018-1077 1099-1158 1163-1221 1222-1281 1290-1349 1350-1409 1444-1502 1505-1563 49-239 93-251 384-424 441-507 525-542 582-599 617-632 697-715 748-824 835-856 891-922 990-1000 1004-1049 1057-1081 1090-1112 1132-1162 1171-1222 1230-1282 1302-1320 1338-1407 1445-1473 1505-1525 1528-1549 2uurA(4-209) 4e-24 31.07% 2uurA(4-209) 1e-36 31.07% PF01391 1.3e-11 49.2% PF01391 0.0002 1.5% PF01391 8.2e-08 36.6% PF01391 4.3e-12 50.8% PF01391 0.00024 0.2% PF01391 3.4e-06 31.2% PF01391 8.3e-05 8.6% PF01391 4.8e-13 53.9% PF01391 6.7e-15 60.1% PF01391 3.4e-09 41.1% PF01391 8.4e-10 43.2% PF01391 2.4e-12 51.6% PF01391 7.9e-10 43.3% PF01391 1e-05 25.7% PF01391 0.00018 2.4% 1z78A1(2-205) 8e-18 15.87% b.29.1 1.2e-13 42.0%

Sequence

MLTSWAPGLWVLGLWATFSHGTNIGERCPTSQQEGLKLEHSSDPSTNVTGFNLIRRLNLM
KTSAIKKIRNPKGPLILRLGAAPVTQPTRRVFPRGLPEEFALVLTVLLKKHTFRNTWYLF
QVTDANGYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVA
SVHVDCVSASSQPLGPRQSIRPGGHVFLGLDAEQGKPVSFDLQQAHIYCDPELVLEEGCC
EILPGGCPPETSKSRRDTQSNELIEINPQTEGKVYTRCFCLEEPQNSKVDAQLMGRNIQK
AERGTKVHQGTGVNECPPCAHSARESNVTLGPSGLKGGKGERGLTGPSGPKGEKGARGND
CVRVSPDAPLQCVEGPKGEKGESGDLGPPGLPGPTGQKGQKGEKGDGGLKGLPGKPGRDG
RPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGEKG
SSGIPGKEGPGGKPGKPGVPGTKGEKGDPCEVCPTLPEGSQNFVGLPGKPGPKGEPGDPA
PAWEGLGTVGLKGDRGDPGIQGMKGEKGEPCSSCSSGVGAQHLGPSPGHGLPGLPGTSGI
PGPRGLKGEKGSFGDTGPAGVPGSPGPVGPAGIKGAKGEPCEPCTALSELQDGDMRVVHL
PGPAGEKGEPGSPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGITGQPGISGEPGIR
GPAGPKGEKGDGCTACPSLQGALTDVSGLPGKPGPKGEPGPEGVGHPGKPGQPGLPGVQG
PPGPKGTQGEPGPPGTGAEGPQGEPGTQGLPGTQGLPGPRGPPGSAGEKGAQGSPGPKGA
IGPMGPPGAGVSGPPGQKGSRGEKGEPGECSCPSRGEPIFSGMPGAPGLWMGSSSQPGPQ
GPPGVPGPPGPPGMPGLQGVPGHNGLPGQPGLTAELGSLPIEKHLLKSICGDCAQGQTAH
PAFLLEKGEKGDQGIPGVPGFDNCARCFIERERPRAEEARGDNSEGEPGCSGSPGLPGPP
GMPGQRGEEGPPGMRGSPGPPGPIGLQGERGLTGLTGDKGEPGPPGQPGYPGAMGPPGLP
GIKGERGYTGPSGEKGESGPPGSEGLPGPQGPAGPRGERGPQGSSGEKGDQGFQGQPGFP
GPPGPPGFPGKAGAPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKD
GKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSSGRPGAEGEPGAM
GPQGRPGPPGHLGPPGQPGPPGLSTVGLKGDRGVPGERGLAGLPGQPGTPGHPGPPGEPG
SDGAAGKEGPPGKQGLYGPPGPKGDPGPAGQKGQAGEKGRSGMPGGPGKSGSMGPIGPPG
PAGERGHPGSPGPAGNPGLPGLPGSMGDMVNYDDIKRFIRQEIIKLFDERMAYYTSRMQF
PMEVAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGDIG
VGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNPSDCF
GAMPMEQQYPPMKSMKGPFG

Region:1-1580
Length:1580aa
Label:Full sequence
Reset:click