Input sequence

Protein name DNA-directed RNA polymerase I subunit rpa1
Organism Dictyostelium discoideum Length 1615
Disorder content 11.2% ProS content 5.6%
IDEAL NA UniProt Q86H36

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1615 1-6 7-151 152-174 175-255 256-271 272-313 314-319 320-323 324-327 328-410 411-415 416-433 434-528 529-536 537-1284 1285-1398 1399-1615 7-151 175-255 272-313 328-410 434-528 537-1284 1399-1615 1-6 152-174 256-271 320-323 416-433 1285-1398 1-6 152-174 256-271 416-433 1309-1312 1321-1336 1345-1352 3-1306 1423-1614 3-1291 1419-1614 439-614 952-1192 624-799 15-102 882-944 10-437 439-619 622-799 846-945 952-1567 12-1255 1419-1611 1-1615 104-113 150-179 1310-1342 1366-1417 4c2mA(1-1270) 0.0 39.78% 4c2mA(1329-1517) 2e-37 42.71% 4c2mA(1-1257) 0.0 38.54% 4c2mA(1325-1517) 3e-48 42.35% PF00623(1-161) 9e-41 49.43% PF04998(1-201) 5e-24 32.92% PF04983(3-145) 9e-20 34.66% PF04997(4-91) 2e-12 37.5% PF05000(45-106) 8e-11 49.21% PF04997 1.8e-11 -6.6% PF00623 9.1e-87 298.8% PF04983 9e-46 162.7% PF05000 6.7e-24 90.0% PF04998 2.4e-128 436.9% 1i3qA(12-1162) 0.0 25.04% 1i3qA(1213-1413) 6e-37 29.06% e.29.1 0.0 1206.2%

Sequence

MSMSQSALIKEEISSVSFQFYTSDDVRKLSVKQIVEIESFDMLGGPVPGGLHDPALGPTG
PAERCATCSLDFIECPGHFGHIELAIPCYNPVSFQTIFKLLKNKCFHCHHFKHGKPIINQ
FIEELTLLFKGDVVKARNLRERNVLLRGYEEKKKGKSNEEGEEVMESDESDSDKMDTDEN
KTNGKIICDGVFNAKEIYSGKATHIEDFKREVFKEFFGSFSGYAIPCGNCGAYSPRLRNG
DASKSKLFIMPLHDKYATKNSAIKLPTNFSSVKEQTEHGTWFAPWEVLDNMKKLFENEKE
ILDMLLGHLVPIVTNKGGAKKNVGRQFTKESNVDSLFMRVFPVTPARYRPPNFVNGRRSE
HPQNSHYKGMVKSNKMIRQSIDAGEGKAKFLVNSVCDLQMHVNNMYDNSKSNSNTNEVAN
GIKQILEKKEGLFRKHMMGKRVNYAARTVISPDISLETNEMGVPQYFAKTLTFPQPVTSF
NYNQLAQAVINGPEQYPGANFIEDENGHLINLSKESQEKRIALSKTLLTSHPHAPRGVNK
KVYRHLLSGDYVLANRQPTLHKPGIMGHRVKVLGKNEKTLRMHYSNCSTYNADFDGDEMN
IHFPQSLLASAEIREICANNYQYLVPRNGAPLRGLIQDHILTGVLLTKRDTLFTKADFQA
ILYASCWSVNTKHPIVTPPPCILKPVPLWSGKQLISAALNQLTIGRAPLNLEAPSKIPTK
MWGTKGLEITRDSHVIIRQNEMVAGILDKGHFGASSYGLVHTCYELYDPDVAGSLLTLLG
RMFTNYLQSRGFTCGVDDLLMKNKEEKFRVETLKKANEEGYTVAAKFADLSKYDEQKARD
FFSKALQSEREVARLDGLLKKGLNQYTSKVIDTLIPGGQQKPFPKNNFSLMTVSGAKGSV
VNFSQVSCLLGQQELEGKRVPRMVSGKTLPSFQAYDASARAGGFVMDRFLTGVRPQDYFF
HCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLSVQYDNTVRESDGSVIQFNYGEDSLEI
GKTPYLTKFPIIAENYELFKSQFPMEQLIEQLKNQEVVEYNRSIKTQPELDPVMSKFNPS
SDLGCVSESFMNQLNHYIESNPQKLIKTTSNRDGKINEKDFRNLMYLYYSRSMVSPGESV
GLLCAQSIGEPSTQMTLNTFHLAGRGEANVTLGIPRLRELIMTATTKPITPLMEFQINDS
TNKVETEKMAKYLEILKLSDIIKDITVQEYFQDTNRNYDIEIEFIPTLQQVLSLHRIKEK
QLNKLFGEFNKVIKRQVKSQGKLKVNNGDIGLGSKVRGSDLVEDDSLTINDDDAPANDDT
TNNDENTSQQQPSSQNKKSKSKVITQDDDSVAAKSKNKKKQNVNYEDGEEEAEEKDSDEG
ESEAEESDDKSDVDSDSDEISNSRSSNSFSDESIEFDQKKLTFTISVASDSKKVLMLGIV
ETEASKFVLKSCKGITRCFVNEKQVGGKTHYSIQSEGVNLSEIFELRDKLKIDEIYTNDI
YAILQKYGVEACRQAVTSEISNVFAAYGISVDKRHLILLGDYMTFEGGYRALNRIGIENN
TSPFQKMSFETTFSFLSKASLMGDYDTVTSPSSRIVLGQIVKNGTGSFTIVAPVK

Region:1-1615
Length:1615aa
Label:Full sequence
Reset:click