Input sequence

Protein name Intermediate filament protein ifd-1
Organism Caenorhabditis elegans Length 575
Disorder content 20.2% ProS content 5.7%
IDEAL NA UniProt Q86DC6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 575 1-42 43-299 300-318 319-346 347-349 350-412 413-464 465-575 43-299 319-346 350-412 465-575 1-42 300-318 347-349 413-464 300-318 347-349 444-449 460-464 116-363 53-81 468-567 67-395 53-404 52-406 468-568 430-573 31-43 43-91 350-412 1c1gA(24-271) 2e-06 21.15% 1gk7A(4-32) 0.001 58.62% 1ifrA(6-112) 0.0002 12.04% 4rh7A(1606-1937) 0.0006 13.37% PF00038(1-310) 9e-19 25.57% PF00038 8.2e-08 -34.6% 1ifrA(6-110) 1e-13 16.04% b.1.16 6.3e-10 34.6%

Sequence

MSKLNPRVAHNPVLSRIIESGRTNLPSGITSAGSLSAYAQAAAVTIRDNRDREKREIADL
NNRLARYVEKVRFLEAQNRVLENDIGLFRQAAHIHTGKVRDYYDAEKTSLATLVREQEAK
VSSAKQNIRKLEPEITTAIRTLASSLEHRQRVRSDKKEQLKHLSDLESETAYIKRLINDC
DDEKSHLKTEISRIRGEIKRILALRDKERNGFSRSQTAAQDLLKKLNATISTHEIAIREE
INKARRDSTDKNREFFHRELHMSMKEIRDQFESDSKKARKTWEEWYKKKITEIKKRSEKF
SLTQNQAREEVLRIRSLLNELRTKISDADSMTQALSKRIEDMKFREDEELRMFEQSLTEK
ELAVTRMRDECAKLSVELETLVENQINLRSEIAHYRKLMEQAENLRTSYQSDFVIDTPSP
LMRTSSHHYGSSYSLNVRDTHNKTVHHDNYDISSASTINTQQFRSYGKGDVKIIEHKDES
IVIENSNSYKSKDLSNWKINHYVNGALTGTFILPVATHIHPHEKISIHSLKSPNLMDDIV
ATQIYSFDFSKNTKTVLLDDVDDEVGWYAHVSYSH

Region:1-575
Length:575aa
Label:Full sequence
Reset:click