Input sequence

Protein name DEAD-box ATP-dependent RNA helicase 42
Organism Oryza sativa subsp.japonica Length 1049
Disorder content 36.5% ProS content 11.4%
IDEAL NA UniProt Q84UQ1

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1049 1-54 55-117 118-143 144-200 201-359 360-367 368-810 811-931 932-934 935-943 944-1035 1036-1049 55-117 144-200 368-810 932-934 944-1035 1-54 118-143 201-359 811-931 935-943 1036-1049 1-5 15-22 50-54 221-229 278-292 324-341 355-359 811-839 844-853 929-931 935-939 1042-1049 382-796 383-802 450-621 691-765 448-622 690-766 436-777 349-786 10-135 143-174 184-223 242-255 262-272 334-358 656-665 849-866 875-902 55-117 144-200 4ljyA(2-431) 1e-80 42.24% 2db3A(4-420) 2e-159 37.83% PF00270(3-167) 8e-36 45.35% PF00271(1-75) 1e-11 40.0% PF00270 4.2e-68 236.9% PF00271 9.9e-32 116.0% 1pjrA1(1-314) 4e-51 9.62% c.37.1 1.9e-76 246.5%

Sequence

MGSSDEAGSSKHHRRDKEKDRERSSSRHHRDRDRERSSSRHHHREDRDDDRDRDRDRERR
HREKERDREERKAREREEREKEKERERARRREERDREERSRRREAAAEEEEEDVDRDRKR
RRRSSHHHHHHRDAEPEGPASGAREEEVVDVEEAERRRQKKKEEEQKQLDEEMETRRRRI
KEWQEMKRREEETKRREQEEAGVGTSAAAAAAPAEAEDGGNAGKKWTLDGEESDEEGNQE
DGKKSDDNGGSGAGAMDVDVPNGGDNANGANAMDEDEIDPLDAFMNSMVLPEVAKLESMP
AANVDDKNDKSAKDAVTNGDKKGPKKVMGRIIQGEDSDSDYADDEDDEGGSEDEDDEEFM
KRVKKTKAEKLAIVDHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVP
KPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVL
PMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQ
ISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQ
NTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFR
LLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSN
VCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEE
RYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARK
SAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDLAAQAIAAAQAAAAMVAAKAASNANQQ
TQGTSVGPLLPLAIASNTQNNEATARALQAAFNIQQNLARIQAHAVPEHYEAELEINDFP
QNARWKITHKETLGPIQEWTGAAITTRGTFFPQGKIVGANERKLYLFIEGPTELSVKKAK
AELKRVLEDCANHALNLPGSAQTGKYSVI

Region:1-1049
Length:1049aa
Label:Full sequence
Reset:click