Input sequence

Protein name Collagen alpha-1(XXVII) chain
Organism Rattus norvegicus Length 1855
Disorder content 78.7% ProS content 62.2%
IDEAL NA UniProt Q80ZF0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1855 1-46 47-63 64-74 75-251 252-1653 1654-1855 47-63 75-251 1654-1855 1-46 64-74 252-1653 8-46 263-271 277-281 349-355 365-371 415-430 459-463 537-542 583-592 604-1653 1674-1855 1448-1531 1674-1855 1447-1531 729-797 956-1021 54-246 1671-1854 387-580 619-678 688-747 751-810 826-885 886-945 946-1005 1006-1065 1069-1128 1132-1191 1192-1251 1252-1311 1312-1372 1373-1432 1433-1492 1493-1552 1553-1612 1671-1854 1652-1793 53-235 1433-1562 37-247 8-25 365-381 593-606 628-673 702-728 799-820 826-847 889-919 921-955 1024-1051 1078-1099 1120-1147 1159-1177 1207-1228 1261-1282 1308-1361 1369-1431 1565-1583 1595-1612 4ae2A(1-212) 9e-27 33.18% 2pneA(3-81) 2e-06 39.29% 4ae2A(1-212) 7e-34 32.39% 2pneA(2-81) 6e-07 38.82% 2pneA(11-80) 3e-05 37.14% 2pneA(4-70) 0.0001 35.82% 2uurA(12-206) 0.0003 16.59% PF01410(1-209) 4e-31 37.44% PF05109(483-669) 0.0005 24.27% PF01391 8.3e-09 39.9% PF01391 8.7e-12 49.8% PF01391 1.2e-13 56.0% PF01391 3.4e-11 47.8% PF01391 6.8e-12 50.1% PF01391 1.4e-14 59.0% PF01391 7.5e-12 50.0% PF01391 1.7e-12 52.1% PF01391 6e-11 47.0% PF01391 4.3e-11 47.5% PF01391 3.3e-09 41.2% PF01391 1.2e-05 24.5% PF01391 3.3e-09 41.2% PF01391 1.5e-10 45.6% PF01391 3.6e-11 47.7% PF01391 3.9e-10 44.3% PF01410 5.4e-36 130.2% 1j83A(17-173) 6e-22 9.04% 1z78A1(4-197) 3e-13 11.5% 1af0A1(78-221) 9e-08 11.81% b.29.1 8.2e-17 52.0%

Sequence

MGLARATAGLGPCCPPAPALLGAGLRWGGFLFAWILVSFSCHLASTQGAPEDVDVLQRLG
LSWTKAGGGRSPAPPGVIPFPSGFIFTQRAKLQAPTTNVLPTTLGRELALVLSLCSHRVN
HAFLFAIRSRKHRLQLGLQFLPGRTLVHLGPRQSVAFDLDVHDGRWHHLALELRGRTVTL
VTACGQHRVPVPLPSRRDSMLDPQGSFLLGKMNPRAVQFEGALCQFSIHPVAQVAHNYCA
HLRERCRQVDTYGPQVGALFPWDSGPAFALHPEPALLGLGNLTRNPATLGSRPISRGLMV
TMAPAVPTKPLRMVHQDVSKLGSSQTPLVPAKQSARKTPSPFPSAALANSTRVFHSAPAQ
PRQITATSPTKRPPTKPSVSSLSVTPMKSPQAIQKAGTPSFSRPIPTTQKPTPLTSHPSP
SKVSSATVRPVQKTFMTPQPPTLSPQALHPITGLPKKFTIPTVAKPQSKMTSWASKPVLA
RTNVPKALEQTVVAQSSVSYLGSQTLATALPPLGVGNSRMMPSTRDSTSTPAGSKKITGL
EASKKTRHKSSPRKPIPLSSGKTARDASPRDLTTKPSQLSTPALVLAPAHLLSSSPQPTS
SSFSFFHLPEPTPFLMLMGPPGSKGDCGLPGPPGLPGLPGSPGPRGPRGPPGPFGNPGLP
GPPGAKGQKGDPGLSPGQAHDGAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQP
GPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEM
GRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGV
GEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPP
GPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRK
GFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPK
GSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRV
GPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEM
GPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDR
GDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQL
GEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPK
GEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGH
PGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGN
PGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGK
RGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGL
MGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWGLQGPRGPPGPRGRPGPPGPPWHPVQFQQ
DDLEAAFQTWMDAHGAVRLEQGYSYPDQLMLDQGGEIFKTLHYLSNLIQSIKTPLGTKEN
PARVCRDLMDCEQKMADGIYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKAEFAVS
RVQMNFLHLLSSEGTQHITIHCLNMTVWQEGPARPSARQAVRFRAWNGQVFEAGGQFRPE
VSMDGCKVHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL

Region:1-1855
Length:1855aa
Label:Full sequence
Reset:click