Input sequence

Protein name E3 ubiquitin-protein ligase TRIM56
Organism Mus musculus Length 734
Disorder content 13.9% ProS content 9.3%
IDEAL NA UniProt Q80VI1

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 734 1-13 14-89 90-93 94-99 100-153 154-164 165-377 378-452 453-458 459-466 467-734 14-89 100-153 165-377 453-458 467-734 1-13 94-99 378-452 459-466 11-13 384-389 396-403 410-452 459-466 5-60 6-79 169-207 521-677 21-59 164-205 571-727 17-71 164-221 12-105 230-263 468-729 118-133 277-293 302-309 381-399 432-447 220-247 256-290 1z6uA(31-85) 0.0002 35.71% 2ct2A(4-80) 5e-11 33.75% 2yvrA(7-45) 1e-06 38.46% 3mkqA(341-504) 0.0004 18.29% PF00097 1.8e-07 35.4% PF00643 0.00029 24.7% 1q7fA(26-183) 8e-18 22.84% 1borA(5-55) 4e-10 38.18% 2djaA1(9-67) 6e-08 30.51% g.44.1 8.4e-14 46.4% c.23.1 0.00052 11.7% b.68.9 1.8e-25 78.7%

Sequence

MNSKVSSPTLLEALSSDFLACKICLEQLHTPKTLPCLHTYCQDCLAQLDIGGQVRCPECR
EIVPVPAEGVAAFKTNFFVNGLLDLVKARAPGDVHSGKPTCALCPLVGGKSSGGPATARC
LDCADDLCQACADGHRCSRQTHKHRVVDLVGYRAGWYDEEARERQASQCPQHPGEALCFL
CQPCSQLLCKDCRLGPHIDHPCLPLAEAVRSRKPGLEELLAGVDSNLVELEATRVAEKEA
LALLREQAASVGTQVEEAAERILKSLLAQKQEVLGQLRALVEAAEEATRERLTKIERQEQ
VAKAAAAFARRVLSLGLEAEILSLEGAITQRLRQLQDAPWTSGPTRCVLPQLELHPGLED
KNCHLLRLIFEEPKQSPKDSGKGGAGTQGGDEAQGQGDDRTKIGKQGGAQPLTPKEGKDQ
NPQEDDGVFIERGNRPNKKKKCKGRGKSVSREPSPILRPNLEGSGLLPRPVFSWSFPTRM
PGDKRSPRITGLCPYGPQEILVADEQNRVLKRFSLNGDYKGTVQVPEGCSPCSVAALQNA
VAFSANAKLYLVSPDGEIQWRRSLSLTQSSHAVAAMPCGDRVAVSVAGHVEVYKKDGSLA
TRFIPGGKASRGQRALVFLTTSPQGNFVGSDWQQNSVVFCDGLGQVIWEYKGPGLHGCQP
GSVSVDKKGYIFLTLREVNKVVILDPKGSLLGDFLTAYHGLEKPRVTTMVDGKYLVVSLS
NGTIHVFRVRFPDS

Region:1-734
Length:734aa
Label:Full sequence
Reset:click