Input sequence

Protein name CLIP-associating protein 1
Organism Mus musculus Length 1535
Disorder content 39.7% ProS content 6.9%
IDEAL NA UniProt Q80TV8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1535 1-227 228-234 235-306 307-541 542-849 850-1076 1077-1080 1081-1292 1293-1518 1519-1535 1-227 307-541 850-1076 1293-1518 235-306 542-849 1081-1292 1519-1535 235-241 785-792 799-825 848-849 1124-1130 1170-1172 1187-1199 1225-1233 1257-1280 1287-1292 297-538 20-227 297-538 2-227 1301-1499 337-524 66-211 162-198 1457-1492 27-539 844-1059 1298-1502 1-546 318-1054 857-1505 252-266 280-296 548-568 579-594 606-633 673-706 750-762 820-830 1095-1112 1133-1146 1224-1235 1345-1349 1403-1414 1520-1535 1305-1332 4k92A(2-241) 3e-132 99.17% 4g3aA(18-218) 1e-33 38.28% 4k92A(2-241) 8e-77 98.76% 4g3aA(1-218) 4e-36 36.4% 1u6gC(5-205) 3e-06 21.15% PF12348(10-199) 2e-25 36.46% PF12348(56-204) 8e-18 36.0% PF02985 2.1e-08 38.5% PF02985 0.00076 23.4% 1qgkA(264-787) 3e-23 11.03% 1qbkB(385-595) 2e-11 16.51% 1u6gC(2-208) 4e-14 18.1% a.118.1 1.2e-42 146.1% a.118.1 2.6e-32 108.7% a.118.1 2.6e-45 155.3%

Sequence

MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDRQKSADLEHDQTLLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANEKN
FDDEDSVDGNRPSSASSSSSKAPSSSRRNVNLGTTRRLMSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGSPAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTPDSR
GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGLAGGSSRGPPVTPSSEKRSKIPRS
QGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLDRFGLGQSGR
IPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSR
NGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTR
MFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKAL
DVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLA
VSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKN
SSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLSKPPPPFS
QPNSIPTAPSHKTLRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEP
IKRDGKKDCDIVSRDGGAASPATEGRGGSEIEGGRMALDNKTSLLNTQPPRAFPGPRARE
YNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKG
ALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKN
YAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAI
KMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHL
AQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS

Region:1-1535
Length:1535aa
Label:Full sequence
Reset:click